An activator is a DNA-binding protein that regulates one or more
genes by increasing the rate of transcription.
The activator may increase transcription by virtue of a connected domain which assists in the formation of the RNA polymerase holoenzyme, or may operate through a coactivator. A coactivator binds the DNA-binding activator and contains the domain assisting
holoenzyme formation. A particular activator may bind one or more specific coactivators.
Role in Transcriptional Regulation
RNA polymerase (RNAP) is usually bound to the promoter region on the gene which creates a complex that sometimes undergoes a transition that
allows transcription to take place. An activator essentially recruits the RNAP
to its promotor region, by binding to the activator binding site itself which serves as a liaison between the RNA polymerase and
the DNA. Sometimes, the activator is actually required for the RNA polymerase to transcribe DNA by changing its conformation
through allostery. In this case, RNAP does not spontaneously transform into the
open complex and requires the activator.
Examples
In the lac operon of the bacteria Escherichia
coli, the Lac repressor is constitutively expressed and always bound to the
operator region of the promotor, interfering with the ability of RNAP to bind to the promotor and
transcribe the lac operon. In the presence of lactose, the repressor changes conformation and
falls off the operator and RNAP is able to bind to the promotor. The activator catabolite activator protein (CAP) behaves in the
exact opposite way. Cyclic adenosine monophosphate (cAMP) is present in
low levels of glucose, and binds to CAP which changes to an active conformation. Only then, can CAP act as an activator and help
recruit RNAP to its binding site.
In other words, for maximum expression of the lac genes, there needs to be a high level of lactose (for the repressor to fall
off) and a low level of glucose (for CAP to recruit RNAP) in the cell. Otherwise, either the repressor will bind to the operator
(no genes transcribed), or there is no cooperative binding by CAP thus depending on a spontaneous binding of RNAP (low levels of
genes transcribed).
See also
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