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| Duffy antigen | |
|---|---|
| Identifiers | |
| Symbol | DARC |
| Entrez | 2532 |
| HUGO | 4035 |
| OMIM | 110700 |
| RefSeq | NM_002036 |
| UniProt | Q16570 |
| Other data | |
| Locus | Chr. 1 q21-q22 |
The Duffy antigen is a protein located on the surface of red blood cells and is named after the patient in which it was discovered. In humans, this protein is encoded by the DARC gene.[1]
The protein encoded by this gene is a glycosylated membrane protein and a non-specific receptor for several chemokines. The protein is also the receptor for the human malarial parasites Plasmodium vivax and Plasmodium knowlesi. Polymorphisms in this gene are the basis of the Duffy blood group system.[2]
The gene is also known as CCBP1, Glycoprotein D (GPD), Dfy and CD234.
Contents |
History
In 1950 the Duffy
Genetics and genomics
The Duffy
The Duffy antigen/chemokine receptor gene (DARC) is composed of a single exon. Most Duffy negative blacks carry a silent Fy-b allele with a single T to C substitution at nucleotide -46, impairing the promoter activity in erythroid cells by disrupting a binding site for the GATA1 erythroid transcription factor. The gene is still transcribed in non erythroid cells in the presence of this mutation.
The Duffy negative phenotype occurs at low frequency among whites (~3.5%) and is due to a mutation that results in an unstable protein (Arg89Cys: C-> T at position 265).[4]
The silent allele has evolved at least twice in the black population of Africa and evidence for selection for this allele has been found.[5] The selection pressure involved here appears to be more complex than many text books might suggest.[6] An independent evolution of this phenotype occurred in Papua New Guinea has also been documented.[7]
A comparative study of this gene in seven mammalian species revealed significant differences between species.[8] The species examined included Pan troglodytes (chimpanzee), Macaca mulatta (rhesus monkey), Pongo pygmaeus (orangutan), Rattus norvegicus (brown rat), Mus musculus (mouse), Monodelphis domestica (opposum), Bos taurus (cow) and Canis familiaris (dog).
Three exons are present in humans and chimpanzees while only two exons occur in the other species. This additional exon is located at the 5' end and is entirely non coding. Both intron and exon size varies considerably between the species examined. Between the chimpanzee and the human 24 differences in the nucleotide sequence were noted. Of these 18 occurred in non coding regions. Of the remaining 6, 3 were synonymous and 3 non synonymous mutations. The significance of these mutations if any is not known.
Molecular biology
The Duffy antigen is expressed in greater quantities on reticulocytes than on mature erythrocytes.[9] While the Duffy antigen is expressed on erythrocytes it is also found on some epithelial cells, Purkinje cells of the cerebellum,[10] endothelial cells of thyroid capillaries, the post-capillary venules of some organs[11] and the large pulmonary venules.
The Duffy antigen has been found to act as a multispecific receptor for chemokines of both the C-C and C-X-C families, including:
- melanoma growth stimulatory activity (MGSA, CXCL1/CXCL2),[12]
- regulated upon activation normal T expressed and secreted (RANTES; CCL5)[13]
- monocyte chemotatic protein-1 (MCP-1; CCL2)[14]
and the angiogenic CXC chemokines:
- interleukin-8 (IL-8, CXCL8)
- growth related gene alpha (GRO-α, CXCL1)
- neutrophil activating peptide-2 (NAP-2, CXCL7)
- ENA-78 (CXCL5)
Consequently the Fy protein is also known as DARC (Duffy Antigen Receptor for Chemokines). The chemokine binding site on the receptor appears to be localised to the amino terminus.[15] The antigen is predicted to have 7 transmembrane domains, an exocellular N-terminal domain and an endocellular C-terminal domain. Alignment with other seven transmembrane G-protein-coupled receptors shows that DARC lacks the highly conserved DRY motif in the second intracellular loop of the protein that is known to be associated with G-protein signaling. Consistent with this finding ligand binding by DARC does not induce G-protein coupled signal transduction nor a Ca2+ flux unlike other chemokine receptors. Based on these alignments the Duffy antigen is considered to be most similar to the interleukin-8B receptors.
In DARC-transfected cells, DARC is internalized following ligand binding and this led to the hypothesis that expression of DARC on the surface of erythrocytes, endothelial, neuronal cells and epithelial cells may act as a sponge and provide a mechanism by which inflammatory chemokines may be removed from circulation as well as their concentration modified in the local environment.[16] This hypothesis has also been questioned after knock out mice were created. These animals appeared healthy and had normal responses to infection. While the function of the Duffy antigen remains presently (2006) unknown, evidence is accumulating that suggests a role in neutrophil migration from the blood into the tissues[17] and in modulating the inflammatory response.[18][19][20][21][22][23][24][25][26][27]
The protein is also known to interact with the protein KAI1 (CD82) and may have a role in the control of cancer.
Population genetics
Differences in the racial distribution of the Duffy antigens were discovered in 1954, when it was found that the overwhelming majority of blacks had the erythrocyte phenotype Fy(a-b-): 68% in African Americans and 88-100% in African blacks (including more than 90% of West African blacks).[28] This phenotype is exceedingly rare in whites. Because the Duffy antigen is uncommon in those of Black African descent, the presence of this antigen has been used to detect genetic admixture. In a sample of unrelated African Americans (n = 235), Afro-Caribbeans (n = 90) and Colombians (n = 93), the frequency of the -46T (Duffy positive) allele was 21.7%, 12.2% and 74.7% respectively.[29]
While a possible role in the protection of humans from malaria had been previously suggested, this was only confirmed clinically in 1976.[30] Since then many surveys have been carried out to elucidate the prevalence of Duffy antigen alleles in different populations including:
- The mutation Ala100Thr (G -> A in the first codon position - base number 298) within the FY*B allele was thought to be purely a Caucasian genotype, but has since been described in Brazilians. However, the study's authors point out that the Brazilian population has arisen from miscegenation between Portuguese, Black Africans, and Indians, which accounts for the presence of this mutation in a few members of Brazil's non-Caucasian groups. Two of the three Afro-Brazilian test subjects that were found to have the mutation (out of a total of 25 Afro-Brazilians tested) were also related to one another, as one was a mother and the other her daughter.[31]
- This antigen along with other blood group antigens was used to identify the Basque people as a genetically separate group.[32] Its use in forensic science is under consideration.[33]
- The Andaman and Nicobar Islands, now part of India, were originally inhabited by 14 aboriginal tribes. Several of these have gone extinct. One surviving tribe - the Jarawas - live in three jungle areas of South Andaman and one jungle area in Middle Andaman. The area is endemic for malaria. The causative species is Plasmodium falciparum: there is no evidence for the presence of Plasmodium vivax. Blood grouping revealed an absence of both Fy(a) and Fy(b) antigens in two areas and a low prevalence in two others.[34]
- In the Yemenite Jews the frequency of the Fy allele is 0.5879[35] The frequency of this allelle varies from 0.1083 to 0.2191 among Jews from the Middle East, North Africa and Southern Europe.
- In the Chinese ethnic populations - the Han and the She people - the frequencies of Fya and Fyb alleles were 0.94 and 0.06 and 0.98 and 0.02 respectively.[36]
- In Grande Comore (also known as Ngazidja) the frequency of the Fy(a- b-) phenotype is 0.86.[37]
- In a survey of 115 unrelated Tunisians using both serological and DNA based methods gave the following results: FY*X frequency 0.0174; FY*1 = 0.291 (expressed 0.260, silent 0.031); FY*2 = 0.709 (expressed 0.427; silent 0.282). FY*2 silent is the most common allele in West African blacks and the high prevalence in this sample was interpreted as historical admixture.[38]
Clinical significance
Historically the role of this antigen other than its importance as a receptor for plasmodium parasitic protozoa has not been appreciated. Recent work has identified a number of additional roles for this protein.
Asthma
Asthma is more common and tends to be more severe in those of African descent. There appears to be a correlation with both total IgE levels and asthma and mutations in the Duffy antigen.[39]
Benign ethnic neutropenia
A significant proportion (25-50%) of otherwise healthy African Americans are known to have a persistently lower white blood cell count than the normal range defined for individuals of European ancestry - a condition known as benign ethnic neutropenia. This condition is also found in Arab Jordanians, Black Beduin, Falashah Jews, Yemenite Jews and West Indians. This condition is associated with a reduced capacity to mobilize bone marrow neutrophil reserves in response to corticosteroids, despite normal cellularity and maturation of all cell lines in bone marrow aspirates. Strongly suggestive evidence has been found that links condition to a mutation in the Duffy gene.[40] Although the mechanism is as yet unknown, it is known that neutrophils are retained in the bone marrow through interaction of CXCL12 with its receptor CXCR4. A number of rare diseases are known in which disruption or desensitization of CXCR4 results in failure to release mature neutrophils from bone marrow.
Cancer
Interactions between the metastasis suppressor KAI1 on tumor cells and the cytokine receptor DARC on adjacent vascular cells suppresses tumor metastasis.[41]
HIV infection
A connection has been found between HIV susceptibility and the expression of the Duffy antigen. The absence of the DARC receptor appears to increase the susceptibility to infection by HIV. However once established, the absence of the DARC receptor appears to slow down the progression of the disease.[42]
The association between the Duffy antigen and HIV infection appears to be complex. Leukopenia (a low total white cell count) is associated with relatively poor survival in HIV infection and this association is more marked in caucasians than in negroids despite the (on average) lower white cell counts found in black Africans. This difference appears to correlate with a particular genotype (-46C/C) associated with the absence of the Duffy antigen.[43] This genotype has only been found in black Africans and their descendants. The strength of this association increases inversely with the total white cell count. The basis for this association is probably related to the role of the Duffy antigen in cytokinebinding but this has yet to be verified.
Malaria
On erythrocytes the Duffy antigen acts as a receptor for invasion by the human malarial parasites Plasmodium vivax and Plasmodium knowlesi; Duffy negative individuals whose erythrocytes do not express the receptor are believed to be resistant to merozoite invasion,[44] although it has been reported that P. vivax infection in Duffy negative children in Kenya, suggesting a role in resistance to disease, not infection.[45] This antigen may also play a role in erythrocyte invasion in the rodent malarial parasite Plasmodium yoelii. The epitope Fy6 is required for Plasmodium vivax invasion.[9]
Nancy Ma's night monkey (Aotus nancymaae) is used as an animal model of Plasmodium vivax infection. This species' erythrocytes posses the Duffy antigen and this antigen is used as the receptor for P. vivax on the erythrocytes in this species.[46]
Transfusion medicine
A Duffy negative blood recipient may have a transfusion reaction if the donor is Duffy positive.[29] Since most Duffy-negative people are of African descent, blood donations from people of black African origin are important to transfusion banks.
References
- ^ a b Chaudhuri A, Polyakova J, Zbrzezna V, Williams K, Gulati S, Pogo AO (November 1993). "Cloning of glycoprotein D cDNA, which encodes the major subunit of the Duffy blood group system and the receptor for the Plasmodium vivax malaria parasite". Proc. Natl. Acad. Sci. U.S.A. 90 (22): 10793–7. PMID 8248172. PMC 47864. http://www.pnas.org/cgi/pmidlookup?view=long&pmid=8248172.
- ^ "Entrez Gene: Duffy antigen". http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=2532.
- ^ Cutbush, Marie; Mollison, P.L.; Parkin, Dorothy M. (4 February 1950). "A New Human Blood Group" (PDF). Nature 165 (188-189): 188. doi:. http://www.nature.com/nature/journal/v165/n4188/pdf/165188b0.pdf. Retrieved 2007-06-08.
- ^ Yazdanbakhsh K, Rios M, Storry JR, Kosower N, Parasol N, Chaudhuri A, Reid ME (March 2000). "Molecular mechanisms that lead to reduced expression of duffy antigens". Transfusion 40 (3): 310–20. doi:. PMID 10738032.
- ^ Hamblin MT, Di Rienzo A (May 2000). "Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus". Am. J. Hum. Genet. 66 (5): 1669–79. doi:. PMID 10762551.
- ^ Hamblin MT, Thompson EE, Di Rienzo A (February 2002). "Complex signatures of natural selection at the Duffy blood group locus". Am. J. Hum. Genet. 70 (2): 369–83. doi:. PMID 11753822.
- ^ Zimmerman PA, Woolley I, Masinde GL, Miller SM, McNamara DT, Hazlett F, Mgone CS, Alpers MP, Genton B, Boatin BA, Kazura JW (November 1999). "Emergence of FY*A(null) in a Plasmodium vivax-endemic region of Papua New Guinea". Proc. Natl. Acad. Sci. U.S.A. 96 (24): 13973–7. doi:. PMID 10570183. PMC 24175. http://www.pnas.org/cgi/pmidlookup?view=long&pmid=10570183.
- ^ Awasthi G, Dashb AP, Dasa A (2009) Evolutionary insights into duffy gene in mammalian taxa with comparative genetic analysis. J Vector Borne Dis. 46(3):230-6
- ^ a b Woolley IJ, Hotmire KA, Sramkoski RM, Zimmerman PA, Kazura JW (August 2000). "Differential expression of the duffy antigen receptor for chemokines according to RBC age and FY genotype". Transfusion 40 (8): 949–53. doi:. PMID 10960522.
- ^ Horuk R, Martin AW, Wang Z, et al. (1997). "Expression of chemokine receptors by subsets of neurons in the central nervous system". J. Immunol. 158 (6): 2882–90. PMID 9058825.
- ^ Hadley TJ, Lu ZH, Wasniowska K,et al. (1994). "Postcapillary venule endothelial cells in kidney express a multispecific chemokine receptor that is structurally and functionally identical to the erythroid isoform, which is the Duffy blood group antigen". J. Clin. Invest. 94 (3): 985–91. doi:. PMID 8083383.
- ^ Horuk R, Chitnis CE, Darbonne WC, Colby TJ, Rybicki A, Hadley TJ, Miller LH (August 1993). "A receptor for the malarial parasite Plasmodium vivax: the erythrocyte chemokine receptor". Science (journal) 261 (5125): 1182–4. PMID 7689250. http://www.sciencemag.org/cgi/pmidlookup?view=long&pmid=7689250.
- ^ Horuk R, Wang ZX, Peiper SC, Hesselgesser J (1994). "Identification and characterization of a promiscuous chemokine-binding protein in a human erythroleukemic cell line". J. Biol. Chem. 269 (26): 17730–3. PMID 7517400.
- ^ Chaudhuri A, Zbrzezna V, Polyakova J, Pogo AO, Hesselgesser J, Horuk R (1994). "Expression of the Duffy antigen in K562 cells. Evidence that it is the human erythrocyte chemokine receptor". J. Biol. Chem. 269 (11): 7835–8. PMID 8132497.
- ^ Lu ZH, Wang ZX, Horuk R, et al. (1995). "The promiscuous chemokine binding profile of the Duffy antigen/receptor for chemokines is primarily localized to sequences in the amino-terminal domain". J. Biol. Chem. 270 (44): 26239–45. doi:. PMID 7592830.
- ^ Fukuma N, Akimitsu N, Hamamoto H, Kusuhara H, Sugiyama Y, Sekimizu K (2003). "A role of the Duffy antigen for the maintenance of plasma chemokine concentrations". Biochem. Biophys. Res. Commun. 303 (1): 137–9. doi:. PMID 12646177.
- ^ Lee JS, Frevert CW, Wurfel MM, et al. (2003). "Duffy antigen facilitates movement of chemokine across the endothelium in vitro and promotes neutrophil transmigration in vitro and in vivo". J. Immunol. 170 (10): 5244–51. PMID 12734373.
- ^ Dawson TC, Lentsch AB, Wang Z, et al. (2000). "Exaggerated response to endotoxin in mice lacking the Duffy antigen/receptor for chemokines (DARC)". Blood 96 (5): 1681–4. PMID 10961863.
- ^ Patterson AM, Siddall H, Chamberlain G, Gardner L, Middleton J (2002). "Expression of the duffy antigen/receptor for chemokines (DARC) by the inflamed synovial endothelium". J. Pathol. 197 (1): 108–16. doi:. PMID 12081195.
- ^ Liu XH, Hadley TJ, Xu L, Peiper SC, Ray PE (1999). "Up-regulation of Duffy antigen receptor expression in children with renal disease". Kidney Int. 55 (4): 1491–500. doi:. PMID 10201015.
- ^ Rot A (2005). "Contribution of Duffy antigen to chemokine function". Cytokine Growth Factor Rev. 16 (6): 687–94. doi:. PMID 16054417.
- ^ Segerer S, Regele H, MacK M, et al. (2000). "The Duffy antigen receptor for chemokines is up-regulated during acute renal transplant rejection and crescentic glomerulonephritis". Kidney Int. 58 (4): 1546–56. doi:. PMID 11012889.
- ^ Segerer S, Cui Y, Eitner F, et al. (2001). "Expression of chemokines and chemokine receptors during human renal transplant rejection". Am. J. Kidney Dis. 37 (3): 518–31. PMID 11228176.
- ^ Brühl H, Vielhauer V, Weiss M, Mack M, Schlöndorff D, Segerer S (2005). "Expression of DARC, CXCR3 and CCR5 in giant cell arteritis". Rheumatology (Oxford, England) 44 (3): 309–13. doi:. PMID 15572394.
- ^ Middleton J, Americh L, Gayon R, et al. (2005). "A comparative study of endothelial cell markers expressed in chronically inflamed human tissues: MECA-79, Duffy antigen receptor for chemokines, von Willebrand factor, CD31, CD34, CD105 and CD146". J. Pathol. 206 (3): 260–8. doi:. PMID 15887283.
- ^ Segerer S, Böhmig GA, Exner M, et al. (2003). "When renal allografts turn DARC". Transplantation 75 (7): 1030–4. doi:. PMID 12698093.
- ^ Pruenster M, Rot A (2006). "Throwing light on DARC". Biochem. Soc. Trans. 34 (Pt 6): 1005–8. doi:. PMID 17073738.
- ^ Levinson, Warren (2004). Medical microbiology & immunology: examination & board review. New York: Lange Medical Books/McGraw-Hill. ISBN 0-07-143199-3.
- ^ a b Nickel RG, Willadsen SA, Freidhoff LR, Huang SK, Caraballo L, Naidu RP, Levett P, Blumenthal M, Banks-Schlegel S, Bleecker E, Beaty T, Ober C, Barnes KC (August 1999). "Determination of Duffy genotypes in three populations of African descent using PCR and sequence-specific oligonucleotides". Hum. Immunol. 60 (8): 738–42. doi:. PMID 10439320.
- ^ Miller LH, Mason SJ, Clyde DF, McGinniss MH (August 1976). "The resistance factor to Plasmodium vivax in blacks. The Duffy-blood-group genotype, FyFy". N. Engl. J. Med. 295 (6): 302–4. PMID 778616.
- ^ Estalote AC, Proto-Siqueira R, Silva WA, Zago MA, Palatnik M (2005). "The mutation G298A-->Ala100Thr on the coding sequence of the Duffy antigen/chemokine receptor gene in non-caucasian Brazilians". Genet. Mol. Res. 4 (2): 166–73. PMID 16110438. http://www.funpecrp.com.br/gmr/year2005/vol2-4/gmr0122_abstract.htm.
- ^ Bauduer F, Feingold J, Lacombe D (October 2005). "The Basques: review of population genetics and Mendelian disorders". Hum. Biol. 77 (5): 619–37. doi:. PMID 16596943.
- ^ Ferri G, Bini C, Ceccardi S, Ingravallo F, Lugaresi F, Pelotti S (March 2006). "Minisequencing-based genotyping of Duffy and ABO blood groups for forensic purposes". J. Forensic Sci. 51 (2): 357–60. doi:. PMID 16566771.
- ^ Das MK, Singh SS, Adak T, Vasantha K, Mohanty D (June 2005). "The Duffy blood groups of Jarawas - the primitive and vanishing tribe of Andaman and Nicobar Islands of India". Transfus Med 15 (3): 237–40. doi:. PMID 15943709.
- ^ Kobyliansky E, Micle S, Goldschmidt-Nathan M, Arensburg B, Nathan H (1980). "Duffy, Kell and P blood group systems in some Jewish populations of Israel". Acta Anthropogenet 4 (3-4): 173–9. PMID 7346047.
- ^ Yan L, Zhu F, Fu Q, He J (2005). "ABO, Rh, MNS, Duffy, Kidd,Yt, Scianna, and Colton blood group systems in indigenous Chinese". Immunohematology 21 (1): 10–4. PMID 15783300.
- ^ Chiaroni J, Touinssi M, Frassati C, Degioanni A, Gibert M, Reviron D, Mercier P, Boëtsch G (August 2004). "Genetic characterization of the population of Grande Comore Island (Njazidja) according to major blood groups". Hum. Biol. 76 (4): 527–41. doi:. PMID 15754970.
- ^ Sellami MH, Kaabi H, Midouni B, Dridi A, Mojaat N, Boukef MK, Hmida S (2008). "Duffy blood group system genotyping in an urban Tunisian population". Ann. Hum. Biol. 35 (4): 406–15. doi:. PMID 18608113.
- ^ Vergara C, Tsai YJ, Grant AV, Rafaels N, Gao L, Hand T, Stockton M, Campbell M, Mercado D, Faruque M, Dunston G, Beaty TH, Oliveira RR, Ponte EV, Cruz AA, Carvalho E, Araujo MI, Watson H, Schleimer RP, Caraballo L, Nickel RG, Mathias RA, Barnes KC (November 2008). "Gene encoding duffy antigen/receptor for chemokines is associated with asthma and IgE in three populations". Am. J. Respir. Crit. Care Med. 178 (10): 1017–22. doi:. PMID 18827265.
- ^ Reich D, Nalls MA, Kao WH, Akylbekova EL, Tandon A, Patterson N, Mullikin J, Hsueh WC, Cheng CY, Coresh J, Boerwinkle E, Li M, Waliszewska A, Neubauer J, Li R, Leak TS, Ekunwe L, Files JC, Hardy CL, Zmuda JM, Taylor HA, Ziv E, Harris TB, Wilson JG. (2009) Reduced neutrophil count in people of African descent is due to a regulatory variant in the Duffy antigen receptor for chemokines gene. PLoS Genet. 5(1):e1000360
- ^ Zijlstra A, Quigley JP (September 2006). "The DARC side of metastasis: shining a light on KAI1-mediated metastasis suppression in the vascular tunnel". Cancer Cell 10 (3): 177–8. doi:. PMID 16959609.
- ^ He W, Neil S, Kulkarni H, Wright E, Agan BK, Marconi VC, Dolan MJ, Weiss RA, Ahuja SK (July 2008). "Duffy antigen receptor for chemokines mediates trans-infection of HIV-1 from red blood cells to target cells and affects HIV-AIDS susceptibility". Cell Host Microbe 4 (1): 52–62. doi:. PMID 18621010.
- ^ Kulkarni H, Marconi VC, He W, Landrum ML, Okulicz JF, Delmar J, Kazandjian D, Castiblanco J, Ahuja SS, Wright EJ, Weiss RA, Clark RA, Dolan MJ, Ahuja SK (July 2009). "The Duffy-null state is associated with a survival advantage in leukopenic HIV-infected persons of African ancestry". Blood. doi:. PMID 19620399.
- ^ Miller LH, Mason SJ, Clyde DF, McGinniss MH (1976). "The resistance factor to Plasmodium vivax in blacks. The Duffy-blood-group genotype, FyFy". N. Engl. J. Med. 295 (6): 302–4. PMID 778616.
- ^ Ryan JR, Stoute JA, Amon J, et al. (2006). "Evidence for transmission of Plasmodium vivax among a duffy antigen negative population in Western Kenya". Am. J. Trop. Med. Hyg. 75 (4): 575–81. PMID 17038676.
- ^ McHenry AM, Barnwell JW, Adams JH (October 2009). "Plasmodium vivax DBP binding to Aotus nancymaae erythrocytes is Duffy antigen dependent". J. Parasitol.: 1. doi:. PMID 19799492.
External links
- Duffy at BGMUT Blood Group Antigen Gene Mutation Database at NCBI, NIH
- Duffy gene
- Population data
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