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Epimer

 
(′ep·ə·mər)

(organic chemistry) A type of isomer in which the difference between the two compounds is the relative position of the H (hydrogen) group and OH (hydroxyl) group on the last asymmetric C (carbon) atom of the chain, as in the sugars D-glucose and D-mannose.


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Medical Dictionary: ep·i·mer
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(ĕp'ə-mər)
n.

One of two molecules that differ only in the spatial arrangement around a single carbon atom.

One of two or more isomers which differ only in the configuration about one carbon atom.

Wikipedia: Epimer
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In chemistry, epimers are diastereomers that differ in configuration of only one stereogenic center. Diastereomers are a class of stereoisomers that are non-superposable, non-mirror images of one another.[1] [2]


In chemical nomenclature, one of the epimeric pairs is given the prefix epi- for example in quinine and epi-quinine. When the pairs are enantiomers, the prefix becomes ent-.

Examples

The sugars α-glucose and β-glucose are epimers. In α-glucose, the -OH group on the first (anomeric) carbon is in the direction opposite the methylene group on carbon 6 (in the axial position). In β-glucose, the -OH group is oriented in the same direction as the methylene group (in the equatorial position).[3] These two molecules are both epimers and anomers.

Alpha-D-glucopyranose-2D-skeletal.png Beta-D-glucopyranose-2D-skeletal.png
α-D-glucopyranose
β-D-glucopyranose

β-D-glucopyranose and β-D-mannopyranose are epimers because they differ only in the stereochemistry at the 2 position. The hydroxyl group in β-D-glucopyranose is equatorial (in the "plane" of the ring) while in β-D-mannopyranose the 2 hydroxyl group is axial (up from the "plane" of the ring). These two molecules are epimers but not anomers.

Beta-D-mannopyranose.svg Beta-D-glucopyranose.svg
β-D-mannopyranose
β-D-glucopyranose

Doxorubicin and epirubicin are two closely related drugs and epimers.

Doxorubicin–epirubicin comparison.svg
Doxorubicin–epirubicin comparison

More closely related compounds are epi-inositol and inositol and lipoxin and epilipoxin.

Epi-inositol.svg Myo-inositol.svg Lipoxin B4.svg 15-epi-lipoxin B4.svg
Epi-inositol
Inositol
Lipoxin
Epilipoxin


References

  1. ^ March, Jerry and Smith, Michael B.. March's Advanced Organic Chemistry: Reactions, Mechanisms and Structure. 6th ed. Hoboken, NJ: momo peon & Sons, Inc., 2007.
  2. ^ International Union of Pure and Applied Chemistry. "epimers". Compendium of Chemical Terminology Internet edition.
  3. ^ Structure of the glucose molecule

 
 
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What is the difference between epimer anomer and why anomerisation of glucose is not called epimerisation? Read answer...

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