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Yes there is a difference.

Biologically a plant has roots, stems and leaves; a flower is part of the reproductive system of a plant, although not all plants have flowers!

Ferns and moss for example reproduce by spores (and not seed) although they are plants.

Angiosperms have flowers, whereas mosses, ferns and gymnosperms do not have true "flowers".

There is also a common naming issue which complicates matters, in the US some people simply refer to plants as "flowers" - this creates obvious complications.

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