Here is a short list of transitional fossils:
Cladoselache
tristychius
ctenacanthus
paleospinax
spathobatis
Protospinax
Acanthodians
cheirolepis
mimia
Canobius
Aeduella
Parasemionotus
Oreochima
leptolepis
Osteolepis
Eusthenopteron
Sterropterygion
tiktaalik
panderichthys
Elpistostege
Obruchevichthys
Hynerpeton
Acanthostega
Ichthyostega
Pholidogaster
Pteroplax
Dendrerpeton acadianum
Archegosaurus decheni
Eryops megacephalus
Trematops
Amphibamus lyelli
Doleserpeton annectens
vieraella
Proterogyrinus
Limnosclis
Tseajaia
Solenodonsaurus
Hylonomus
Paleothyris
Captorhinus
Petrolacosaurus
Araeoscelis
Apsisaurus
Claudiosaurus
Planocephalosaurus
Protorosaurus
Prolacerta
Proterosuchus
Hyperodapedon
Trilophosaurus
Coelophysis
Deinonychus
Oviraptor
Lisboasaurus
Archeopteryx
Sinornis
Ambiortus
Hesperornis
Ichthyornis
Paleothyris
Protoclersydrops
Clepsydrops
Archaeothyris
Varanops
Haptodus
Dimetrodon
Sphenacodon
Biarmosuchia
Procynosuchus
Dvinia
Thrinaxodon
Cynognathus
Diademodon
Proelesodon
Probainognathus
Exaeretodon
Oligokyphus
Kayentatherium
Pachygenelus
Diarthrognathus
Adelobasileus
Sinoconodon
Kuehneotherium
Eozostrodon
Morganucodon
Haldanodon
Peramus
Endotherium
Kielantherium
Aegialodon
Steropodon
Vincelestes
Pariadens
Kennalestes
Cimolestes
Procerberus
Gypsonictops
Palaechthon
Purgatorius
Cantius
Pelycodus
Amphipithecus
Pondaungia
Parapithecus
Propliopithecus
Aegyptopithecus
Proconsul
Limnopithecus
Dryopithecus
Pakicetus
Nalacetus
Ichthyolestes
Gandakasia
Ambulocetus
Himalayacetus
Attockicetus
Remingtonocetus
Dalanistes
Kutchicetus
Andrewsiphius
Indocetus
Qaisracetus
Takreacetus
Artiocetus
Babiacetus
Protocetus
Pappocetus
Eocetus
Georgiacetus
Natchitochia
Dorudon
Ancalacetus
Zygorhiza
Saghacetus
Chrysocetus
Gaviacetus
Pontogeneus
Basilosaurus
Basiloterus
Sahelanthropus tchadensis
Orrorin tugenensis
Ardipthecus ramidus
Ardipithecus kadabba
Australopithecus afarensis
Australopithecus africanus
Australopithecus anamensis
Australopithecus garhi
Australopithecus aethiopicus
Australopithecus boisei
Australopithecus robustus
Australopithecus bahreghazali
Homo habilis
Homo rudolfensis
Homo erectus.