
[Middle English, bud, from Old French germe, from Latin germen.]
In the food world, the word "germ" refers to a grain (like wheat) kernel's nucleus or embryo. Wheat germ is one of the more commercially popular types on the market. The nutritiously endowed germ furnishes thiamine, vitamin E, iron and riboflavin.
In the middle of the 19th century, some surgeons realized that doctors could spread disease from one person to another. Ignaz Semmelweiss in 1847 reduced the number of cases of childbed fever by having surgeons wash their hands between deliveries. Joseph Lister in 1865 went further and proposed using carbolic acid (also called phenol) on patients' wounds during surgery.
Doctors were not the only agents spreading disease, of course. John Snow, a doctor in London, noticed that cholera cases were clustered where people used water from particular sources. He persuaded the authorities to remove the pump handle from a well at the center of the largest outbreak area; the number of cases in that area dropped immediately. William Budd learned of Snow's success and repeated it, stopping a cholera epidemic in Bristol in 1866 by managing the town's water supply.
Louis Pasteur urged French army surgeons to sterilize their instruments and their patients during the Franco-Prussian War of 1870. After the war, Pasteur began an extensive study of the causes of disease. He started with anthrax--a disease that affects both farm animals and humans--because another proponent of the newly developing germ theory of disease, Robert Koch, had already found the bacterium that causes anthrax in 1876. Pasteur first helped stop the spread of anthrax by proposing sterilization and burial of the bodies of animals that had died from it. Later he was to find something even more effective.
In 1879 Pasteur discovered by accident that bacteria could be weakened. In their weakened state, they failed to cause disease but still provoked immunity. He soon learned that the anthrax bacterium could be weakened in this way and by 1881 was able to demonstrate that an effective immunization against anthrax resulted from injection with the weakened bacteria. Pasteur called the process of producing immunization in this way vaccination, in recognition of Edward Jenner's use of cowpox (vaccinia) to prevent smallpox. Pasteur, Koch, and others developed vaccines of varying degrees of effectiveness against many of the major communicable diseases of the time--cholera, tuberculosis, tetanus, diphtheria, rabies.
Originally the germ theory applied only to bacteria, but about the same time as Pasteur was writing his major exposition of the theory, Charles Laveran discovered that the organism causing malaria is a protist (sometimes called a protozoan), not a bacterium. The agents of some diseases, especially skin diseases, may be fungi. In other communicable diseases, such as measles, neither a bacterium, protist, nor fungus could be found in the late 19th or early 20th centuries. Because of the success of the germ theory, organisms too small to be seen or trapped in filters--filterable viruses--were postulated to explain these diseases. With the invention of the electron microscope in the 20th century, such viruses were finally observed directly.
Today the germ theory of disease is so entrenched that even diseases that are not communicable--such as cancer, diabetes, and multiple sclerosis--are suspected of being caused by some "germ."
1. old-fashioned and lay term for a pathogenic microorganism.
2. living substance capable of developing into an organ, part or organism as a whole; a primordium. Commonly used to refer to the embryos of wheat grains which are removed during milling and sold separately as wheat germ.

In mathematics, the notion of a germ of an object in/on a topological space captures the local properties of the object. In particular, the objects in question are mostly functions (or maps) and subsets. In specific implementations of this idea, the sets or maps in question will have specific properties, such as being analytic or smooth, but in general this is not needed (the maps or functions in question need not even be continuous); it is however necessary that the space on/in which the object is defined is a topological space, in order that the word local have some sense.
The name is derived from cereal germ in a continuation of the sheaf metaphor, as a germ is (locally) the "heart" of a function, as it is for a grain.
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Given a point x of a topological space X, and two maps f, g : X → Y (where Y is any set), then f and g define the same germ at x if there is a neighbourhood U of x such that restricted to U, f and g are equal; meaning that f(x) = g(x) for all x in U. Similarly, if S and T are any two subsets of X, then they define the same germ at x if there is again a neighbourhood U of x such that

It is straightforward to see that defining the same germ at x is an equivalence relation (be it on maps or sets), and the equivalence classes are called germs (map-germs, or set-germs accordingly). The equivalence relation is usually written
or
.
Given a map f on X, then its germ at x is usually denoted [f ]x. Similarly, the germ at x of a set S is written [S]x. Thus,
![[f]_x = \{g:X\to Y \mid g \sim_x f\}.](http://wpcontent.answcdn.com/wikipedia/en/math/d/7/4/d7427f5606660ae8f79137226bcc303e.png)
To denote a map germ at x in X which maps the point x in X to the point y in Y, one writes

such an f is then an entire equivalence class of maps, and it is usual to use the same letter f for any representative map.
Notice that two sets are germ-equivalent at x if and only if their characteristic functions are germ-equivalent at x:

Maps need not be defined on all of X, and in particular they don't need to have the same domain. However, if f has domain S and g has domain T, both subsets of X, then f and g are germ equivalent at x in X if first S and T are germ equivalent at x, say
, and then moreover
, for some smaller neighbourhood V with
. This is particularly relevant in two settings:
If f and g are germ equivalent at x, then they share all local properties, such as continuity, differentiability etc., so it makes sense to talk about a differentiable or analytic germ, etc. Similarly for subsets: if one representative of a germ is an analytic set then so are all representatives, at least on some neighbourhood of x.
Moreover, if the target Y is a vector space, then it makes sense to add germs: to define [f]x + [g]x, first take representatives f and g, defined on neighbourhoods U and V respectively, then [f]x + [g]x is the germ at x of the map f + g (where f + g is defined on
). (In the same way one can define more general linear combinations.)
The set of germs at x of maps from X to Y does not have a useful topology, except for the discrete one. It therefore makes little or no sense to talk of a convergent sequence of germs. However, if X and Y are manifolds, then the spaces of jets
(finite order Taylor series at x of map(-germs)) do have topologies as they can be identified with finite-dimensional vector spaces.
The idea of germ is behind the definition of sheaves and presheaves. A presheaf
on a topological space X is an assignment of an Abelian group
to each open set U in X. Typical examples of Abelian groups here are: real valued functions on U, differential forms on U, vector fields on U, holomorphic functions on U (when X is a complex space), constant functions on U and differential operators on U.
If
then there is a restriction map
, satisfying certain compatibility conditions. For a fixed x, one says that elements
and
are equivalent at x if there is a neighbourhood
of x with resWU(f) = resWV(g) (both elements of
). The equivalence classes form the stalk
at x of the presheaf
. This equivalence relation is an abstraction of the germ equivalence described above.
If
and
have additional structure, it is possible to define subsets of the set of all maps from X to Y or more generally sub-presheaves of a given presheaf
and corresponding germs: some notable examples follow.
are both topological spaces, the subset
and
admit a differentiable structure, the subset
-times continuously differentiable functions, the subset


here is the ordinal for infinity; this is an abuse of notation, by analogy with
and
∞), and then spaces of germs of (finitely) differentiable, smooth, analytic functions can be constructed.
have a complex structure (for instance, are subsets of complex vector spaces), holomorphic functions between them can be defined, and therefore spaces of germs of holomorphic functions can be constructed.
have an algebraic structure, then regular (and rational) functions between them can be defined, and germs of regular functions (and likewise rational) can be defined.The stalk of a sheaf
on a topological space
at a point
of
is commonly denoted by
. As a consequence germs, being stalks of sheaves of various kind of functions, borrow this scheme of notation:
is the space of germs of continuous functions at
.
for each natural number
is the space of germs of
-times-differentiable functions at
.
is the space of germs of infinitely differentiable ("smooth") functions at
.
is the space of germs of analytic functions at
.
is the space of germs of holomorphic functions (in complex geometry), or space of germs of regular functions (in algebraic geometry) at
.For germs of sets and varieties, the notation is not so well established: some notations found in literature include:
is the space of germs of analytic varieties at
.When the point
is fixed and known (e.g. when
is a topological vector space and
), it can be dropped in each of the above symbols: also, when dim
, a subscript before the symbol can be added. As example
are the spaces of germs shown above when
is a
-dimensional vector space and
.The key word in the applications of germs is locality: all local properties of a function at a point can be studied analyzing its germ. They are a generalization of Taylor series, and indeed the Taylor series of a germ (of a differentiable function) is defined: you only need local information to compute derivatives.
Germs are useful in determining the properties of dynamical systems near chosen points of their phase space: they are one of the main tools in singularity theory and catastrophe theory.
When the topological spaces considered are Riemann surfaces or more generally analytic varieties, germs of holomorphic functions on them can be viewed as power series, and thus the set of germs can be considered to be the analytic continuation of an analytic function.
di
(Germs of differentiable functions at a point
of
)" (in Italian).This entry is from Wikipedia, the leading user-contributed encyclopedia. It may not have been reviewed by professional editors (see full disclaimer)
Dansk (Danish)
n. - bakterie, smittekim, mikrobe, spire
idioms:
Nederlands (Dutch)
bacil, (ziekte)kiem, grondgedachte
Français (French)
n. - microbe, (lit, fig) germe
idioms:
Deutsch (German)
n. - Keim, Krankheitserreger
idioms:
Ελληνική (Greek)
n. - (βιολ.) σπέρμα, μικρόβιο, (μτφ.) αρχική αιτία, σπέρμα
idioms:
Italiano (Italian)
germe, bacillo
idioms:
Português (Portuguese)
n. - micróbio (m), embrião (m), semente (f), origem (f)
idioms:
Русский (Russian)
микроб, эмбрион, завязь, давать ростки
idioms:
Español (Spanish)
n. - germen, bacilo, microbio, bacteria
idioms:
Svenska (Swedish)
n. - embryo, bakterie, frö
中文(简体)(Chinese (Simplified))
细菌, 根源, 种子
idioms:
中文(繁體)(Chinese (Traditional))
n. - 細菌, 根源, 種子
idioms:
한국어 (Korean)
n. - 세균, 배[종], 기원
idioms:
日本語 (Japanese)
n. - 胚, 微生物, 細菌, 病原菌, 芽生え, 根源, 芽
v. - 芽を出す, 開く
idioms:
العربيه (Arabic)
(الاسم) جرثومه
עברית (Hebrew)
n. - חיידק, נבט, התהוות, ראשית
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