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Infectious disease

 
(in′fek·shəs di′zēz)

(medicine) Any disease caused by invasion by a pathogen which subsequently grows and multiplies in the body.


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Infectious Diseases

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Concept

The history of the human species, it has been said, is the history of infectious disease. Over the centuries, humans have been exposed to a vast amount and array of contagious conditions, including the Black Death and other forms of plague, typhoid fever, cholera, malaria, influenza, and the acquired immunodeficiency syndrome, or AIDS. Only in the past few hundred years have scientists begun to have any sort of accurate idea concerning the origin of such diseases, through the action of microorganisms and other parasites. Such understanding has led to the development of vaccines and methods of inoculation, yet even before they made these great strides in medicine, humans had an unseen protector: their own immune systems.

How It Works

Infection and Immunity

There are two basic types of disease: ones that are infectious, or extrinsic, meaning that they are contagious or communicable and can be spread by contact between people, and ones that are intrinsic, or not infectious. Diseases in general and noninfectious diseases in particular are discussed in essays devoted to those subjects. So, too, is infection itself, a subject separate from infectious diseases: a person can get an infection, such as tetanus or salmonella, without necessarily having a disease that can be passed on through contact with others in the same way that colds, malaria, or syphilis is spread.

The background on scientists' progressive understanding of the microorganisms that cause disease and the means of fighting these microorganisms are discussed in Infection. Among the leading figures in that history were the French chemist and microbiologist Louis Pasteur (1822-1895) and the German bacteriologist Robert Koch (1843-1910), who contributed greatly to what is known today as germ theory—the idea that infection and infectious diseases are brought about by microorganisms. In most cases, the organisms are too small to be seen with the naked eye. They include varieties of amoeba and worm, discussed in the essay Parasites and Parasitology, as well as viruses and some forms of bacteria and fungi, which together are known as pathogens, or disease-carrying parasites. Other terms related to infectious diseases, their agents, and the prevention and study of them are defined in the essay Infection.

Immune Mechanisms

The human body has numerous mechanisms for protecting itself from infectious disease, the first line of defense being the skin. Skin shields us all the time from unseen attackers and generally is able to prevent pathogens from entering the body; however, any break in the skin, such as a cut or scrape, provides an opening for microorganisms to invade the body. Germs that normally would be prevented from entering the body are able to invade the bloodstream through such openings. This is why it is so very important, in any situation involving potential contact with infection, to protect the skin. With the advent of AIDS, doctors and members of other professions who are likely to touch people carrying diseases—including officers arresting addicts or prostitutes—are much more likely to do their work wearing heavy plastic gloves.

Suppose that a microorganism makes it through the barrier of skin, thanks to a cut or other opening; if so, the body puts into action a second defensive mechanism, the immune system. This system is a network of organs, glands, and tissues that protects the body from foreign substances. Without a properly functioning immune system, a person could die simply by walking out the door in the morning and coming into contact with an airborne infectant. Even in relatively healthy people, the immune system may be unable to react adequately to an invasion of microorganisms. In such cases, disease develops.

Transmission of Diseases

Infectious diseases, by definition, are transmitted easily from one person to another. We have all been told, for instance, not to drink after someone who has a cold. On a much more serious level, persons who are sexually active or potentially sexually active, but not settled in a monogamous (one-partner) relationship, are advised to avoid unprotected sexual contact so as not to contract AIDS or some other sexually transmitted disease (STD). In these and many other cases, microorganisms travel from the carrier of the disease to the uninfected person. (Actually, in the case of AIDS, the pathogen is a virus, which is not, strictly speaking, an organism or even a living thing; however, viruses usually are lumped in with bacteria, amoeba, and some fungi as microorganisms.)

Pathogens can be spread by many methods other than direct contact, including through water, food, air, and bodily fluids—blood, semen, saliva, and so on. For instance, any time a person with an infection coughs or sneezes, they may be transmitting illness. This is how diseases such as measles and tuberculosis are passed from person to person. AIDS and various STDs, as well as many other conditions, such as hepatitis, are transferred when one person comes into contact with the bodily fluids of another. This is the case not only with sexual intercourse but also with blood transfusions and any number of other interactions, including possibly drinking after someone. (Contrary to rumors that circulated in the early 1980s, when AIDS first made itself known, that particular syndrome cannot be transferred by saliva, but the common cold and other viral infections can be.)

Cholera, caused by a bacterium found in dirty wells and rivers from India to England (in the 1800s, at least), is an example of a waterborne disease. Many foodborne pathogens tend to bring about what would be more commonly thought of as an illness than a disease, since in everyday language the latter term implies a long-term affliction, whereas food poisoning usually lasts for a week or so. (Still, some forms of food poisoning can be fatal.) Bacterial contamination may occur when food is not cooked thoroughly, is left unrefrigerated, is prepared by an infected food handler, or otherwise is handled in an unsanitary or improper fashion. (The case of Typhoid Mary, discussed near the conclusion of this essay, is an extreme example of this form of transmission.)

Additionally, diseases may be transferred by vectors—animals (usually insects) that carry microorganisms from one person to another. Vectors may spread a disease either by mechanical or by biological means. Mechanical transmission occurs, for example, when flies transfer the germs for typhoid fever from the feces (stool) of infected people to food eaten by healthy people. Biological transmission takes place when an insect bites a person and takes infected blood into its own system. Once inside the insect's gut, the disease-causing organisms may reproduce, increasing the number of parasites that can be transmitted to the next victim. This is how the Anopheles mosquito vector, for instance, transfers malaria.

Real-Life Applications

A Tour of Diseases

The range of infectious diseases, from conditions that merely cause discomfort to those that bring about death, is truly staggering. Some have brought about vast epidemics that have wiped out huge populations, and many have changed the course of history, while others are hardly known to anyone outside the ranks of epidemiologists and the victims of the disease. Some, such as smallpox, have been eradicated or largely eradicated through inoculation campaigns, while others, most notably AIDS, continue to elude efforts to defeat them.

Diseases can be classified according to the systems or body parts affected. Some of those systems and parts, with examples of diseases relating to each, include the following.

Another way to classify diseases is according to the types of organism that cause them: bacteria, viruses, or other forms of parasite, particularly worms, amoeba, and insects. The first two groups are discussed in further detail within Infection and the other varieties of parasite in Parasites and Parasitology.

Bacterial infections include anthrax, botulism, tetanus (lockjaw), leprosy, tuberculosis, diphtheria, whooping cough, plague, and a variety of pneumococcal, staphylococcal, and streptococcal illnesses. Among viral illnesses and diseases are the common cold, influenza, infectious mononucleosis, smallpox, chicken pox, measles, mumps, rubella (or German measles), yellow fever, poliomyelitis (i.e., polio), rabies, herpes simplex, and AIDS. Diseases related to other varieties of parasite include malaria, Rocky Mountain spotted fever, trichinosis, scabies, and river blindness. Nonmicroscopic parasites, particularly such worms as hookworm and pin-worm, bring about disease-like forms of parasitic infestation within the body.

Plagues

From earliest times infectious diseases have wreaked havoc on the human species, and this was particularly so with the various plagues that struck Europe in ancient and medieval times. As noted in Infection, a plague in the fifth century B.C. helped bring an end to the golden age of Greek civilization. A thousand years later, another plague befell Greece, which by then dominated what remained of the Roman Empire. Based in Byzantium (Constantinople) this realm became known to history as the Byzantine (Eastern Roman), Empire, though its citizens saw themselves simply as "Romans" and thus as the inheritors of Roman civilization. Italy itself had fallen under the control of nomadic invaders, the Visigoths, but Emperor Justinian I (483-565) undertook a vast and costly campaign to wrest control of the Italian peninsula from the barbarians. Had he succeeded, the entire course of medieval history in Western Europe might have been different; he did not, largely because of a plague that swept Constantinople in 541.

Through a series of interconnected events, the plague permanently weakened Byzantium and left the Mediterranean world ripe for conquest by a new power: Islam. Both directly and indirectly, the plague of 541 served to divide Eastern and Western Europe. Not only was the Roman Empire never truly reunited, meaning that the two halves of the continent grew increasingly separate, but the rise of Islam made possible the Crusades (1095-1291). The latter sowed further discord between the East and the West, owing to the fact that Western European crusaders overran Byzantium and incited trouble between the Byzantines and Arabs. Ultimately, the split between Eastern and Western Europe, which became particularly pronounced during the years of Communism and the Iron Curtain (1945-1990), can be traced to the plague of 541.

The Black Death

The Byzantine plagues (there were several, occurring at intervals of a few generations), killed millions of people, yet for sheer scope of destruction—and, perhaps, historical impact—they were dwarfed by the plague that devastated Europe in the years 1347-1351. This one became known as the Plague (with a capital P) or by another name that gave some hint of the terror that was as much a part of the epidemic as the ghastly physical symptoms it brought on: the Black Death.

It began in Asia and quickly made its way to the shores of the Black Sea, where it erupted in September 1346. The first outbreak in Western Europe occurred 13 months later, in October 1347, at the Sicilian port of Messina, from whence it was an easy jump to the Italian mainland. By the following April all of Italy was infected; meanwhile, the Plague had reached Paris in January 1348, and within a year, 800 people a daywere dying in that city alone. Quickly it penetrated the entire European continent and beyond, from North Africa to Scandinavia and from England to the hinterlands of Russia. By 1351 it hadspread so far and wide that sailors arriving in Greenland found its ports deserted.

The only merciful thing about the Black Death was that death came quickly. Victims typically died within four days—a hundred hours of agony. If they caught a strain of bubonic plague, their lymph glands swelled; if it was pneumonicplague, the lungs succumbed first. Either way, as the end approached, the victim turned purplish-black from respiratory failure—hence the name Black Death.

Social Impact of the Plague

Lacking any modern concept of what causes disease, people looked for spiritual explanations. Some believed that the world was coming to an end, while others joined sects of flagellants, religious enthusiasts who wandered the countryside, beating themselves with lashes as a way of doing penance. The flagellants were tied closely tied to a rising trend toward anti-Semitism: searching for someone to blame, Europeans found a convenient scapegoat in the Jews, who, they claimed, had started the Plague by poisoning the wells of Europe.

The Black Death aptly illustrates how infectious diseases can have an impact on history in ways both big and small. In just five years the disease killed about 30% of Europe's population, which had been 100 million in 1300 but which would not reach that level again until 1500. All over the continent, farms were emptied and villages abandoned, leading to scarcity and higher prices. In the short run, these economic conditions spurred peasant revolts, but in the long run, the shortage of workers brought about higher wages and contributed to the emergence of the working and middle classes. Neither popes nor priests, neither kings nor noblemen, were any more equipped than the common people to confront the fearsome disease, and this, too, helped provoke the rise of competing classes and new centers of power in European society.

The Etiology of the Plague

The Black Death, in short, may be regarded as the beginning of the end of the Middle Ages—a hideously painful event that nevertheless carried positive consequences, which might hardly have been achieved without it. The irony was that the force at the center of all this devastation and change was too small to be seen by the naked eye. Although the disease was carried by rats, the cause of the Black Death was actually a bacillus known today as Pastuerella pestis or Yersinia pestis, which uses fleas as a vector. Modern medicines such as streptomycin, a variety of antibiotic developed after World War II, would have stopped the Plague, but such concepts were a long time in coming. Although the worst phase of the epidemic ended in 1351, it continued to spread, reaching Moscow by 1353; the next five centuries saw occasional outbreaks of the disease. As late as 1894 a strain of plague killed more than six million people in Asia over the course of 14 years.

The Changing Face of Disease

The many biblical passages dealing with leprosy illustrate the role that infectious disease has played in human life from the earliest times. The fact that leprosy causes the victim's skin to turn ghostly white and brings about a gradual withering away of body parts must certainly have seemed like a curse from God. In fact, leprosy, also known as Hansen disease, is caused by the bacillus Mycobacterium leprae, and despite the many fears throughout the ages associated with touching lepers, it is not very contagious. A scene in the 1973 blockbuster Papillon illustrates this fact. The title character, a prison escapee played by Steve McQueen, takes a drag from a cigar offered to him by a leper, who then asks him if he knew that leprosy is not contagious. Papillon says no, indicating that he simply intended to build a sense of shared risk with someone who he hoped would aid his escape.

The example of leprosy shows something about the many curiosities involved in diseases and their study: for example, the fact that a disease can be infectious without being significantly contagious. Leprosy is by definition infectious, inasmuch as it is caused by a pathogen known as Mycobacterium leprae, but the latter is unusual for a number of reasons, including the fact that it is extremely slow in dividing, unlike most bacteria. After years of study, researchers are still not clear as to how leprosy is transmitted, and many believe that genetics may play a role. Thanks to increased understanding of the disease, the stigma that used to go with leprosy—including the reference to people with the disease as "lepers"—has largely been lifted. Yet places such as the leprosy facilities at Carville, Louisiana, and Molokai, Hawaii, continued to exist for many years, if only because the disfigurement associated with the disease influenced the separation of leprosy sufferers from the rest of society. In 1998, with only about 6,000 victims of the disease left in the entire country, the federal government closed the facilities at Carville and Molokai.

Leprosy remains a threat, with some two million cases of the disease worldwide, primarily in nations of Asia, Africa, and Latin America that are both underdeveloped and located in tropical zones. It has, however, ceased to be the worldwide danger that it once was, and as such it joins ranks with numerous other afflictions that formerly held all of humankind in the grip of terror. For example, tuberculosis, caused by a bacillus that attacks the lungs, afflicted a huge population in the nineteenth century, bringing an end to the careers of figures that ranged from the great English poet John Keats to the American gunslinger Doc Holliday. Holliday, in fact, traveled to Tombstone, Arizona, where he and Wyatt Earp participated in the infamous shootout at the O.K. Corral, because he thought the climate would help his condition. Their story has been portrayed in countless films; for example, in Tombstone (1993), Val Kilmer gives an extremely convincing portrayal of the debilitating effects that Holliday's tuberculosis (aggravated by his lifestyle) must have had on him. Today, tuberculosis is not nearly the scourge that it once was, though it remains a problem, particularly because of patients' increasing resistance to the antibiotics used to treat it. (See Infection for more about antibiotics.)

Vaccination and Continuing Threats

When Europeans invaded the lands of Native Americans, they brought with them a host of microorganisms to which they had developed an immunity but to which the Indians were completely vulnerable. Although Europeans and their descendants had developed immunities to various diseases, thanks to generations of exposure to pathogens, they and the rest of the world remained vulnerable to a host of contagious disease, including cholera, smallpox, chicken pox, measles, mumps, yellow fever, polio, malaria, and many others. Today, vaccines have virtually eradicated many of these contagious diseases and keep others at bay. (Anyone who has ever had a cholera vaccine, which causes the patient's body to become miserably sore, achy, and tender for about 48 hours, has some idea of just how awful the disease itself must be.) Polio, which once posed an enormous threat to American children and crippled one of America's greatest leaders, President Franklin D. Roosevelt, is an artifact of history, thanks to vaccines developed after World War II.

Yet some killers never really die. For instance, malaria, caused by a protozoan parasitic genus known as Plasmodium and spread by mosquito biological vectors, infects from 300 to 500 million people annually and kills up to 2.7 million people every year. Although the substance known as quinine showed some promise as a treatment during most of the nineteenth and twentieth centuries, Plasmodium has become increasingly resistant to it. In the search for a cure for what has been called "the most devastating disease in history," some 100,000 drugs have been tested.

Some Other Killers

The twentieth century saw its own version of the Plague, in the form of the 1918-1920 influenza epidemic. Carried to all corners of the globe by soldiers returning from World War I, "the Influenza," as it came to be known (again with a capital letter to distinguish it as the greatest outbreak of a particular disease), killed 20 million people—more than the war itself. Then there is the greatest epidemic of the latter part of the twentieth century and the early twenty-first century: AIDS. This disease is linked to the human immunodeficiency virus (HIV), a retrovirus (see Infection for an explanation of retrovirus) that causes a gradual breakdown of the victim's immune system.

People do not die of AIDS per se but of the illnesses—particularly pneumonia or Kaposi's sarcoma, a cancer of the tissues—to which AIDS makes them susceptible. The disease is transmitted primarily by sexual contact and intravenous drug use. A smaller number of particularly tragic cases result from no actions on the part of the victim, who in this case is either the recipient of infected blood or the child of a mother with AIDS. Since the disease first came to public attention in 1981, 21.8 million people worldwide (and about 750,000 in the United States) have died from it. The vast majority of deaths have been in sub-Saharan Africa, and 90% of all AIDS cases are in developing countries. Worldwide, approximately 36.1 million people have either HIV or AIDS. (For more about AIDS, see Immunity and Immunology.)

The Ebola Virus

AIDS was not the only infectious condition to come out of central Africa and terrorize the world in the late twentieth century. Beginning in about 1975, numerous viruses, previously unknown and terrifyingly lethal, emerged from tropical regions of Africa, South America, and Asia. So great was the rise of new infectious diseases that some epidemiologists believed this was tied with economic development: as humans cultivated previously undeveloped lands and delved into more isolated parts of the world, they might be exposing new viruses.

Few of these inspired as much terror as the Ebola virus, and the fear is understandable, given the effects of the disease. Three to nine days after the illness enters the body, the victim begins to experience fever and other flu-like symptoms, sudden exhaustion, sore throat, muscle pain, and headache. Vomiting and diarrhea soon follow, and the vomit and stools are black with blood. Soon hemorrhaging occurs, with blood flowing from the nose, ears, and even the eyes. Internal organs begin to liquefy, and within three weeks of contracting the virus, the victim is usually dead.

An almost unbelievably hideous condition, Ebola might seem at first glance a great deal like the Black Death. Why, then, has it not ravaged whole populations the way the Plague did? It is certainly not because scientists have a cure for Ebola; the best doctors can hope to do, if they detect the disease early enough, is to provide supportive care, such as blood transfusions, that may save the patient's life. Yet even the worst outbreaks of the disease have not occurred on anything like the scale of the Plague: the worst known outbreak of Ebola, in Uganda in 2000-2001, killed 425 people.

Part of the reason Ebola is not capable of spreading rapidly is, ironically, because it is such an efficient killer: it kills its human victims before they have a chance to spread it to many other victims. Other than nonfatal incidents in laboratories in the United States, England, and Italy, as well as one case in a monkey export facility in the Philippines—various primates are carriers—all Ebola cases and outbreaks have been in Africa, primarily in Zaire (now Democratic Republic of the Congo), Sudan, and Gabon. Many times, local conditions, situations, and practices have exacerbated the spread of the disease. For example, in 1996, a group of people in Gabon found a dead chimpanzee in the forest and ate it; as a result, 37 people died. The Uganda outbreak became much worse than it might have been because locals, lacking education as to antiseptic procedures, failed to take proper precautions. Many died as a result of attending funerals of Ebola victims at which bodies were not disposed of properly.

Typhoid Mary

Sometimes a single person can be a walking epidemic, as in the case of the Irish cook Mary Mallon (1869-1938), better known as "Typhoid Mary." Mallon was an example of the fact that some people, because of genetic characteristics or other specifics, can act as carriers of a disease without ever contracting it themselves. Even though Typhoid Mary had Salmonella typhosa bacteria in her system, she did not get sick; still, she was highly contagious, and her profession as cook made her particularly dangerous. At least three deaths and 53 cases of typhoid fever were linked directly to her, with thousands of other probable cases of infection indirectly caused by this human vector.

Part of what made her so notorious—hence her nickname, given to her by the press—was the fact that Mallon did not seem to care how many people she infected. In the first decade of the twentieth century, authorities tracked her down as the cause of, or at least a contributing factor in, an outbreak of typhoid in the New York City area. Instead of cooperating with officials, Mallon repeatedly escaped before being caught and confined to Riverside Hospital on New York's North Brother Island in 1910. She served three years in isolation there before her release, after which she promptly went back to work as a cook—despite explicit orders not to do so. It was this (and an outbreak of typhoid fever at her place of work, which happened to be a hospital) that earned her the nickname by which she became known to history. She was caught again in 1915 and spent the remainder of her life on North Brother Island.

The Threat of Biological Warfare

Infinitely more despicable than Typhoid Mary are terrorists and rogue nations that would willingly unleash infectious disease on large, unsuspecting civilian populations. One such pathogen is Bacillus anthracis, the cause of anthrax, a deadly bacterial disease of cattle and other grazing animals. Under the right circumstances, anthrax can kill a human in about 36 hours, though a number of antibiotic treatments are effective in the early stages of the disease.

During the late twentieth century, the United States and Soviet Union experimented with the use of anthrax in biological warfare, and an accidental release of anthrax spores at a Soviet lab in 1979 led to some 68 deaths. Following the September 11, 2001, terrorist attacks on the World Trade Center in New York City and on the Pentagon, a series of letters containing anthrax spores showed up around the United States, and exposure to the disease led to a handful of deaths. Although the attacks were linked initially to Osama bin Laden and his al-Qaeda organization, authorities increasingly began to suspect that home-grown terrorists were simply exploiting the September 11 attacks as cover for their own deeds.

Still, there was little doubt that bin Laden, the Iraqi dictator Saddam Hussein, or North Korea's ruling clique would use biological agents if the opportunity arose. One threat that loomed in the aftermath of September 11 was the possibility that bin Laden's followers would reintroduce the smallpox virus, which had been eradicated by worldwide vaccinations during the 1970s. The reason why smallpox could pose such a great threat is precisely that it has been eliminated, and few Americans born after 1973 have received vaccines. Unless they gained access to one of the two labs worldwide (one in the United States and one in Russia) where smallpox virus is stored for the purpose of making vaccines, however, terrorists would be unable to obtain a sample. (It is this matter of access that led authorities to suspect that the anthrax attacks were an "inside job.")

Another biological agent that poses a threat is Clostridium botulinum, which causes botulism, a toxic condition that can result in paralysis. Members of the fanatic Japanese cult Aum Shinrikyo attempted unsuccessfully to launch botulism attacks in Tokyo on three occasions in 1995. The Japanese government itself—that is, the Axis Japanese government of World War II—experimented with another biological agent, tularemia, or Francisella tularensis. The pathogen, which causes lung inflammation and death, is considered one of the most dangerous forms of biological weapon, because it is extremely efficient and easy to spread. America's military, borrowing an idea from its former enemy, developed its own F. tularensis strain in the late 1960s but destroyed its stockpile in 1973.

Where to Learn More

Centers for Disease Control and Prevention (Web site). <http://www.cdc.gov/>.

Cranmer, Hilarie. Anthrax Infection. Emedicine.com (Web site). <http://www.emedicine.com/emerg/topic864.htm>.

DeSalle, Rob. Epidemic!: The World of Infectious Disease. New York: New Press, 1999.

Everything You Need to Know About Diseases. Spring-house, PA: Springhouse Corporation, 1996.

Ewald, Paul W. Plague Time: How Stealth Infections Cause Cancers, Heart Disease, and Other Deadly Ailments. New York: Free Press, 2000.

Hoff, Brent H., Carter Smith, and Charles H. Calisher. Mapping Epidemics: A Historical Atlas of Disease. New York: Franklin Watts, 2000.

Infection and Immunity. University of Leicester Microbiology and Immunology (Web site). <http://wwwmicro.msb.le.ac.uk/MBChB/MBChB.html>.

Marr, Lisa. Sexually Transmitted Diseases: A Physician Tells You What You Need to Know. Baltimore, MD: Johns Hopkins University Press, 1998.

Oldstone, Michael B. A. Viruses, Plagues, and History. New York: Oxford University Press, 1998.

Shein, Lori. AIDS. San Diego: Lucent Books, 1998.


A pathological condition spread among biological species. Infectious diseases, although varied in their effects, are always associated with viruses, bacteria, fungi, protozoa, multicellular parasites and aberrant proteins known as prions. A complex series of steps, mediated by factors contributed by both the infectious agent and the host, is required for microorganisms or prions to establish an infection or disease. Worldwide, infectious diseases are the third leading cause of human death.

The most common relationship between a host and a microorganism is a commensal one, in whichadvantages exist for both organisms. For example, hundreds of billions of bacteria of many genera live in the human gastrointestinal tract, coexisting in ecological balance without causing disease. These bacteria help prevent the invasion of the host by more virulent organisms. In exchange, the host provides an environment in which harmless bacteria can readily receive nutrients. There are very few microorganisms that cause disease every time they encounter a host. Instead, many factors of both host and microbial origin are involved in infectious disease. These factors include the general health of the host, previous exposure of the host to the microorganism, and the complement of molecules produced by the bacteria.

Spread of a pathogenic microorganism among individual hosts is the hallmark of an infectious disease. This process, known as transmission, may occur through four major pathways: contact with the microorganism, airborne inhalation, through a common vehicle such as blood, or by vector-borne spread.

The manner in which an infectious disease develops, or its pathogenesis, usually follows a consistent pattern. To initiate an infection, there must be a physical encounter as which the microorganism enters the host. The most frequent portals of entry are the respiratory, gastrointestinal, and genitourinary tracts as well as breaks in the skin. Surface components on the invading organism determine its ability to adhere and establish a primary site of infection. The cellular specificity of adherence of microorganisms often limits the range of susceptible hosts. For example, although measles and distemper viruses are closely related, dogs do not get measles and humans do not get distemper. From the initial site of infection, microorganisms may directly invade further into tissues or travel through the blood or lymphatic system to other organs.

Microorganisms produce toxins that can cause tissue destruction at the site of infection, can damage cells throughout the host, or can interfere with the normal metabolism of the host. The damage that microorganisms cause is directly related to the toxins they produce. Toxins are varied in their mechanism of action and host targets. See also Cholera; Staphylococcus.

The host's reaction to an infecting organism is the inflammatory response, the body's most important internal defense mechanism. Although the inflammatory response is also seen as secondary to physical injury and nonspecific immune reactions, it is a reliable indicator of the presence of pathogenic microorganisms. Immune cells known as lymphocytes and granulocytes are carried by the blood to the site of infection. These cells either engulf and kill, or secrete substances which inhibit and neutralize, microorganisms. Other white blood cells, primarily monocytes, recognize foreign organisms and transmit chemical signals to other cells of the host's immune system, triggering the production of specific antibodies or specialized killer cells, both of which are lethal to the infecting microorganism. Any influence that reduces the immune system's ability to respond to foreign invasion, such as radiation therapy, chemotherapy, or destruction of immune cells by an immunodeficiency virus such as HIV, increases the likelihood that a organism will cause disease within the host. See also Inflammation.

Chemical compounds that are more toxic to microorganisms than to the host are commonly employed in the prevention and treatment of infectious disease; however, the emergence of drug-resistant organisms has led to increases in the morbidity and mortality associated with some infections. Other methods for controlling the spread of infectious diseases are accomplished by breaking a link in the chain of transmission between the host, microorganism, and mode of spread by altering the defensive capability of the host. Overall, the three most important advances to extend human life are clean water, vaccination, and antibiotics (in that order of importance).

Water-borne infections are controlled by filtration and chlorination of municipal water supplies. Checking food handlers for disease, refrigeration, proper cooking, and eliminating rodent and insect infestation have markedly reduced the level of food poisonings. The transmission of vector-borne diseases can be controlled by eradication of the vector. Blood-borne infections are reduced by screening donated blood for antibodies specific for HIV and other viruses and by rejecting donations from high-risk donors. For diseases such as tuberculosis, the airborne spread of the causative agent, Mycobacterium tuberculosis, can be reduced by quarantining infected individuals. The spread of sexually transmitted diseases, including AIDS, syphilis, and herpes simplex, can be prevented by inhibiting direct contact between the pathogenic microorganism and uninfected hosts. See also Acquired immune deficiency syndrome (AIDS); Food poisoning; Vaccination; Water-borne disease.


Oxford Companion to the Body:

infectious diseases

Top

Infectious diseases are the result of damaging microorganisms obtaining access to the body, and not being repelled or destroyed by the immune system. Their relationship to man is that of parasite and host, and is continually adjusting. Numerous different types of bacteria, viruses, and other organisms may cause disease, and infection may take place through close contact with an infected person, or through the respiratory, digestive, or genito-urinary systems, depending on the organism and the disease involved. Infection may also occur by transmission from an animal, or via an insect vector. Organisms can damage the body by their multiplication in or around its cells, or by the widespread poisonous effects of substances (toxins) which they release. Many infectious diseases are of a self-limiting character, ending in either full recovery or death. While certain of them may occasionally have long-term sequelae, the body, if its defences win, for the most part returns to normal, often retaining a lifelong subsequent immunity against that specific infection. Other infections, such as syphilis, are, however, chronic, and eventually fatal if untreated.

Diseases included in the category ‘infectious’ include colds and influenza; the familiar infectious illnesses of childhood, and the more serious conditions such as poliomyelitis, diphtheria and meningitis, typhoid, typhus, cholera, dysentery, and smallpox. Tuberculosis is also an infectious disease, although its clinical progress is chronic rather than acute.

Most of these diseases have a very ancient history. While many only emerge as identifiable entities in the medical writings of the seventeenth and eighteenth centuries, others can be demonstrated to have been present in antiquity. Smallpox, for example, which was declared eradicated by the World Health Organisation in 1977, can clearly be identified by characteristic lesions on the mummified corpses of ancient Egyptians, while a stele of the same civilization, dating from 1580-1350 bc, shows a young man displaying a withered and shortened left leg, held in the ‘equinus position’ characteristic of paralysis possibly caused by poliomyelitis. Infectious diseases also occur in the animal kingdom, and some, such as anthrax and yellow fever, are transmissible to man.

Understanding

While the closely allied concepts of infection and contagion (transmission of disease from one person to another by direct or indirect contact) are probably almost as old as mankind, it was only in the mid nineteenth century, with the development of accurate microscopes and of laboratory research, that these processes began to be scientifically elucidated. Several observers indicated the likelihood of microorganisms as causal agents of disease, and even detected their paths of transmission, such as the faecal-oral route for typhoid and cholera, but it was Louis Pasteur who, in the early 1860s, first gave a coherent account of the process of infection in what is popularly known as the germ theory of disease. In 1876, Robert Koch identified the causal organism of anthrax, and within a few years had also identified the agents of tuberculosis and cholera. By 1900, the specific agents of numerous diseases had been identified, and the diverse routes of transmission — of infection and contagion — were beginning to be mapped out.

Infectious diseases are often ‘crowd diseases’, which depend for the most part on reservoirs of susceptible people to maintain themselves. Person to person infections, for example, are thought to have become more apparent between 3000 and 500 bc, when urban centres grew large enough to support them. These diseases soon established an endemic character in such centres, meaning that the diseases or infectious agents were constantly present in that area. City populations, exposed early in life, acquired high levels of immunity to them, compared with rural populations. Rapid and unregulated urban growth brought a great escalation in the incidence of and mortality from many of these diseases in Western Europe and North America during the nineteenth century, and several, including tuberculosis, typhoid, measles, and whooping cough, were responsible for much human misery and many thousands of deaths. Recurrent gastro-intestinal infections, in particular, helped to undermine the health, and natural resistance to infection, of babies and young children, and indeed of adults also. By 1830, annual death rates of over 30 per 1000 living persons were commonplace in Western cities, while infant mortality rates rivalled those of under-developed nations today.

Prevention

Beginning in the 1830s, public health movements began to develop in many Western states in response to this crisis of mortality. For example, in Britain — one of the first nations to begin to adopt public health measures — early reformers such as Edwin Chadwick stressed the enormous economic costs of such a wastage of life. At this period, notions of contagion marched in parallel with a belief that gases generated by rotting organic matter were productive of epidemics, and early attempts at preventing premature deaths focused on environmental improvement. Slowly and painfully, through the following decades, filtered and piped water systems, mains drainage, systematic scavenging, and slum clearance brought about cleaner, healthier urban environments, and disrupted the transmission routes of a number of important infections, notably of water-borne typhoid and cholera and of louse-borne typhus.

The development of specific methods of prevention came late in the history of the infectious diseases. Smallpox, one of the most ancient and most hideous diseases, was the first to be tackled in this way. At some point, the Chinese had discovered that by introducing matter taken from smallpox vesicles into a scratch on the normal healthy body, controlled, immunizing infections could be established. This method, the inoculation of material containing the living organism, itself was not foolproof, since it was not possible to ensure a mild rather than a virulent infection, which might prove fatal. Nonetheless, knowledge of the technique spread along trade routes to Turkey, and thence to Europe in the early eighteenth century. In 1796, a Gloucestershire medical practitioner, Edward Jenner, picked up on local lore which suggested that infections with cow-pox would protect against smallpox, and demonstrated that this was indeed the case. This practice, vaccination (from vaccinus: pertaining to a cow) was later refined, and, encouraged by many European governments, the introduction of the modified or related organism displaced inoculation as the principal preventive against smallpox. At this stage, however, the processes and principles which made vaccination effective were still not understood.

Smallpox vaccination represented an ideal for disease eradication which provided an important model for future medical research. Louis Pasteur, for example, set out in his later career to investigate the principles of immunology with a view to understanding how vaccination worked. Pasteur's breakthrough with the principle of attenuating viruses — reducing their virulence — came in 1876. This meant that the body's immunity to subsequent infection by a virulent organism could be actively provoked in response to a non-threatening form of the same strain; Pasteur proceeded to develop immunizations against various animal diseases, including anthrax and rabies. It was his reluctant application of rabies vaccine to the boy Joseph Meister in 1883 that first alerted the general public to the eventual possibilities of immunology.

As the discipline developed through the work of Pasteur, his colleagues, and his successors, new therapeutic and preventive indications emerged. Early successes came for diphtheria in 1894 with anti-toxin therapy (the use of material produced by the inoculation of animals with toxins produced by bacteria), and for both diphtheria and tetanus with the development of active immunization (the production of protective antibodies by stimulating the body's immune system). In 1896, Almroth Wright succeeded in producing an anti-typhoid vaccine using killed bacteria, thus extending the theoretical options for vaccine development. In the interwar period, successful vaccines were developed against diphtheria and tuberculosis, and, in the years following World War II, they were developed against most of the principal childhood infections — whooping cough, poliomyelitis, German measles, and measles, and eventually against mumps and chicken-pox as well.

Since 1870, there has been an enormous decline in death rates from infectious diseases in developed countries. This decline has been hastened by the availability of immunizations, but in most cases had begun well before such protection was available. Rising living standards — including smaller families, better housing, improved domestic hygiene, a reduced incidence of gastro-intestinal infections, and better nutrition — together with public health measures contributed largely to this reduction. Many childhood diseases remain serious in poor and under-developed countries. Immunization, although a valuable resource with some diseases, is by no means a viable prospect for all infections; despite decades of research, no vaccine has yet been approved for malaria, one of the world's most serious infections.

New infections

New infectious diseases are still emerging, and there is no room for complacency in this regard. The emergence of poliomyelitis as a serious killer and maimer between about 1911 and 1962 was partly attributable to improved hygienic standards in the West, which meant that children were no longer harmlessly exposed to the virus as babies. Lassa fever, exemplar of a whole new generation of sinister tropical fevers, emerged in Nigeria in 1969, while Legionnaires' disease was identified in the US in the 1970s. The rapid global spread of HIV infection since 1980 echoes that of syphilis in Europe in the fifteenth century. Epidemics of the terrifying Ébola virus in Zaire, and of bubonic plague in India in the early 1990s, indicate that both new and old infections retain the potential for major human tragedy. One consequence of global warming could possibly be the reappearance of malaria as an indigenous infection in parts of the world which have been free of it for many decades. Relentless human exploitation of tropical resources, uncontrolled human reproduction, increased travel, and unregulated technological development all create the potential for unleashing fresh manifestations of new and old infections by disturbing global environmental equilibrium.

— Anne Hardy

Bibliography

  • Garrett, L. (1996). The coming plague: newly emerging diseases in a world out of balance. Penguin Books, London.
  • McNeill, W. H. (1979). Plagues and peoples. Penguin Books, Harmondsworth

See also antibiotics; epidemic; fever; immune system; immunization; microorganisms; sexually transmitted diseases.

Diseases that are caused by micro-organisms such as bacteria and viruses, many of which are spread from person to person. An intermittent host, or vector, aids the spread of some infectious diseases.

Diseases caused by the growth of pathogenic organisms in the body. Some of these diseases may also be contagious diseases.

Wiley Dictionary of Flavors:

Infectious Diseases

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Diseases of man or animal that are transferred by the ingestion of food substances, insect bites, or other causes. Usually the introduction of the organism into the body is by way of direct introduction into the bloodstream or into the bloodstream via intestinal absorption. See Diseases, Pathogenic (Pathological) Organisms.

Mosby's Dental Dictionary:

infectious disease

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n

Pathologic alterations induced in the tissues by the action of microorganisms and/or their toxins. Some infectious diseases involving the oral tissues are herpes zoster, herpetic gingivostomatitis, moniliasis, syphilis, and tuberculosis.

Wikipedia on Answers.com:

Infectious disease

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Infectious disease
Classification and external resources

A false-colored electron micrograph shows a malaria sporozoite migrating through the midgut epithelia.
ICD-10 A00-B99
ICD-9 001-139
MeSH D003141

Infectious diseases, also known as contagious diseases or transmissible diseases, and include communicable diseases,comprise clinically evident illness (i.e., characteristic medical signs and/or symptoms of disease) resulting from the infection, presence and growth of pathogenic biological agents in an individual host organism. In certain cases, infectious diseases may be asymtomatic for much or all of their course. Infectious pathogens include some viruses, bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions. These pathogens are the cause of disease epidemics, in the sense that without the pathogen, no infectious epidemic occurs.

Transmission of pathogen can occur in various ways including physical contact, contaminated food, body fluids, objects, airborne inhalation, or through vector organisms.[1] Infectious diseases that are especially infective are sometimes called contagious and can be easily transmitted by contact with an ill person or their secretions. Infectious diseases with more specialized routes of infection, such as vector transmission or sexual transmission, are usually regarded as contagious but do not require medical quarantine of victims.

The term infectivity describes the ability of an organism to enter, survive and multiply in the host, while the infectiousness of a disease indicates the comparative ease with which the disease is transmitted to other hosts.[2] An infection is not synonymous with an infectious disease, as some infections do not cause illness in a host.[1]

Classification

Among the almost infinite varieties of microorganisms, relatively few cause disease in otherwise healthy individuals.[3] Infectious disease results from the interplay between those few pathogens and the defenses of the hosts they infect. The appearance and severity of disease resulting from any pathogen depends upon the ability of that pathogen to damage the host as well as the ability of the host to resist the pathogen. Clinicians therefore classify infectious microorganisms or microbes according to the status of host defenses - either as primary pathogens or as opportunistic pathogens:

  • Primary pathogens cause disease as a result of their presence or activity within the normal, healthy host, and their intrinsic virulence (the severity of the disease they cause) is, in part, a necessary consequence of their need to reproduce and spread. Many of the most common primary pathogens of humans only infect humans, however many serious diseases are caused by organisms acquired from the environment or which infect non-human hosts.
  • Organisms which cause an infectious disease in a host with depressed resistance are classified as opportunistic pathogens. Opportunistic disease may be caused by microbes that are ordinarily in contact with the host, such as pathogenic bacteria or fungi in the gastrointestinal or the upper respiratory tract, and they may also result from (otherwise innocuous) microbes acquired from other hosts (as in Clostridium difficile colitis) or from the environment as a result of traumatic introduction (as in surgical wound infections or compound fractures). An opportunistic disease requires impairment of host defenses, which may occur as a result of genetic defects (such as Chronic granulomatous disease), exposure to antimicrobial drugs or immunosuppressive chemicals (as might occur following poisoning or cancer chemotherapy), exposure to ionizing radiation, or as a result of an infectious disease with immunosuppressive activity (such as with measles, malaria or HIV disease). Primary pathogens may also cause more severe disease in a host with depressed resistance than would normally occur in an immunosufficient host.[1]

One way of proving that a given disease is "infectious", is to satisfy Koch's postulates (first proposed by Robert Koch), which demands that the infectious agent be identified only in patients and not in healthy controls, and that patients who contract the agent also develop the disease. These postulates were first used in the discovery that Mycobacteria species cause tuberculosis. Koch's postulates can not be met ethically for many human diseases because they require experimental infection of a healthy individual with a pathogen produced as a pure culture. Often, even diseases that are quite clearly infectious do not meet the infectious criteria. For example, Treponema pallidum, the causative spirochete of syphilis, cannot be cultured in vitro - however the organism can be cultured in rabbit testes. It is less clear that a pure culture comes from an animal source serving as host than it is when derived from microbes derived from plate culture. Epidemiology is another important tool used to study disease in a population. For infectious diseases it helps to determine if a disease outbreak is sporadic (occasional occurrence), endemic (regular cases often occurring in a region), epidemic (an unusually high number of cases in a region), or pandemic (a global epidemic).

Transmission

Washing one's hands, a form of hygiene, is the most effective way to prevent the spread of infectious disease.

An infectious disease is transmitted from some source. Defining the means of transmission plays an important part in understanding the biology of an infectious agent, and in addressing the disease it causes. Transmission may occur through several different mechanisms. Respiratory diseases and meningitis are commonly acquired by contact with aerosolized droplets, spread by sneezing, coughing, talking, kissing or even singing. Gastrointestinal diseases are often acquired by ingesting contaminated food and water. Sexually transmitted diseases are acquired through contact with bodily fluids, generally as a result of sexual activity. Some infectious agents may be spread as a result of contact with a contaminated, inanimate object (known as a fomite), such as a coin passed from one person to another, while other diseases penetrate the skin directly.[1]

Transmission of infectious diseases may also involve a vector. Vectors may be mechanical or biological. A mechanical vector picks up an infectious agent on the outside of its body and transmits it in a passive manner. An example of a mechanical vector is a housefly, which lands on cow dung, contaminating its appendages with bacteria from the feces, and then lands on food prior to consumption. The pathogen never enters the body of the fly.

Culex mosquitos (Culex quinquefasciatus shown) are biological vectors that transmit West Nile Virus.

In contrast, biological vectors harbor pathogens within their bodies and deliver pathogens to new hosts in an active manner, usually a bite. Biological vectors are often responsible for serious blood-borne diseases, such as malaria, viral encephalitis, Chagas disease, Lyme disease and African sleeping sickness. Biological vectors are usually, though not exclusively, arthropods, such as mosquitoes, ticks, fleas and lice. Vectors are often required in the life cycle of a pathogen. A common strategy used to control vector borne infectious diseases is to interrupt the life cycle of a pathogen by killing the vector.

The relationship between virulence and transmission is complex, and has important consequences for the long term evolution of a pathogen. Since it takes many generations for a microbe and a new host species to co-evolve, an emerging pathogen may hit its earliest victims especially hard. It is usually in the first wave of a new disease that death rates are highest. If a disease is rapidly fatal, the host may die before the microbe can get passed along to another host. However, this cost may be overwhelmed by the short term benefit of higher infectiousness if transmission is linked to virulence, as it is for instance in the case of cholera (the explosive diarrhea aids the bacterium in finding new hosts) or many respiratory infections (sneezing and coughing create infectious aerosols).

Prevention

One of the ways to prevent or slow down the transmission of infectious diseases is to recognize the different characteristics of various diseases.[4] Some critical disease characteristics that should be evaluated include virulence, distance traveled by victims, and level of contagiousness. The human strains of Ebola virus, for example, incapacitate its victims extremely quickly and kills them soon after. As a result, the victims of this disease do not have the opportunity to travel very far from the initial infection zone.[5] Also, this virus must spread through skin lesions or permeable membranes such as the eye. Thus, the initial stage of Ebola is not very contagious since its victims experience only internal hemorrhaging. As a result of the above features, the spread of Ebola is very rapid and usually stays within a relatively confined geographical area. In contrast, the Human Immunodeficiency Virus (HIV) kills its victims very slowly by attacking their immune system.[1] As a result, many of its victims transmit the virus to other individuals before even realizing that they are carrying the disease. Also, the relatively low virulence allows its victims to travel long distances, increasing the likelihood of an epidemic.

Another effective way to decrease the transmission rate of infectious diseases is to recognize the effects of small-world networks.[4] In epidemics, there are often extensive interactions within hubs or groups of infected individuals and other interactions within discrete hubs of susceptible individuals. Despite the low interaction between discrete hubs, the disease can jump to and spread in a susceptible hub via a single or few interactions with an infected hub. Thus, infection rates in small-world networks can be reduced somewhat if interactions between individuals within infected hubs are eliminated (Figure 1). However, infection rates can be drastically reduced if the main focus is on the prevention of transmission jumps between hubs. The use of needle exchange programs in areas with a high density of drug users with HIV is an example of the successful implementation of this treatment method. [6] Another example is the use of ring culling or vaccination of potentially susceptible livestock in adjacent farms to prevent the spread of the foot-and-mouth virus in 2001.[6]

General methods to prevent transmission of pathogens may include disinfection and pest control.

Immunity

Mary Mallon (a.k.a Typhoid Mary) was an asymptomatic carrier of typhoid fever. Over the course of her career as a cook, she infected 53 people, three of whom died.

Infection with most pathogens does not result in death of the host and the offending organism is ultimately cleared after the symptoms of the disease have waned.[3] This process requires immune mechanisms to kill or inactivate the inoculum of the pathogen. Specific acquired immunity against infectious diseases may be mediated by antibodies and/or T lymphocytes. Immunity mediated by these two factors may be manifested by:

  • a direct effect upon a pathogen, such as antibody-initiated complement-dependent bacteriolysis, opsonoization, phagocytosis and killing, as occurs for some bacteria,
  • neutralization of viruses so that these organisms cannot enter cells,
  • or by T lymphocytes which will kill a cell parasitized by a microorganism.

The immune system response to a microorganism often causes symptoms such as a high fever and inflammation, and has the potential to be more devastating than direct damage caused by a microbe.[1]

Resistance to infection (immunity) may be acquired following a disease, by asymptomatic carriage of the pathogen, by harboring an organism with a similar structure (crossreacting), or by vaccination. Knowledge of the protective antigens and specific acquired host immune factors is more complete for primary pathogens than for opportunistic pathogens.

Immune resistance to an infectious disease requires a critical level of either antigen-specific antibodies and/or T cells when the host encounters the pathogen. Some individuals develop natural serum antibodies to the surface polysaccharides of some agents although they have had little or no contact with the agent, these natural antibodies confer specific protection to adults and are passively transmitted to newborns.

Host genetic factors

The clearance of the pathogens, either treatment-induced or spontaneous, it can be influenced by the genetic variants carried by the individual patients. For instance, for genotype 1 hepatitis C treated with Pegylated interferon-alpha-2a or Pegylated interferon-alpha-2b (brand names Pegasys or PEG-Intron) combined with ribavirin, it has been shown that genetic polymorphisms near the human IL28B gene, encoding interferon lambda 3, are associated with significant differences in the treatment-induced clearance of the virus. This finding, originally reported in Nature,[7] showed that genotype 1 hepatitis C patients carrying certain genetic variant alleles near the IL28B gene are more possibly to achieve sustained virological response after the treatment than others. Later report from Nature[8] demonstrated that the same genetic variants are also associated with the natural clearance of the genotype 1 hepatitis C virus.

Diagnosis

Diagnosis of infectious disease sometimes involves identifying an infectious agent either directly or indirectly. In practice most minor infectious diseases such as warts, cutaneous abscesses, respiratory system infections and diarrheal diseases are diagnosed by their clinical presentation. Conclusions about the cause of the disease are based upon the likelihood that a patient came in contact with a particular agent, the presence of a microbe in a community, and other epidemiological considerations. Given sufficient effort, all known infectious agents can be specifically identified. The benefits of identification, however, are often greatly outweighed by the cost, as often there is no specific treatment, the cause is obvious, or the outcome of an infection is benign.

Diagnosis of infectious disease is nearly always initiated by medical history and physical examination. More detailed identification techniques involve the culture of infectious agents isolated from a patient. Culture allows identification of infectious organisms by examining their microscopic features, by detecting the presence of substances produced by pathogens, and by directly identifying an organism by its genotype. Other techniques (such as X-rays, CAT scans, PET scans or NMR) are used to produce images of internal abnormalities resulting from the growth of an infectious agent. The images are useful in detection of, for example, a bone abscess or a spongiform encephalopathy produced by a prion.

Microbial culture

Four nutrient agar plates growing colonies of common Gram negative bacteria.

Microbiological culture is a principal tool used to diagnose infectious disease. In a microbial culture, a growth medium is provided for a specific agent. A sample taken from potentially diseased tissue or fluid is then tested for the presence of an infectious agent able to grow within that medium. Most pathogenic bacteria are easily grown on nutrient agar, a form of solid medium that supplies carbohydrates and proteins necessary for growth of a bacterium, along with copious amounts of water. A single bacterium will grow into a visible mound on the surface of the plate called a colony, which may be separated from other colonies or melded together into a "lawn". The size, color, shape and form of a colony is characteristic of the bacterial species, its specific genetic makeup (its strain), and the environment which supports its growth. Other ingredients are often added to the plate to aid in identification. Plates may contain substances that permit the growth of some bacteria and not others, or that change color in response to certain bacteria and not others. Bacteriological plates such as these are commonly used in the clinical identification of infectious bacterium. Microbial culture may also be used in the identification of viruses: the medium in this case being cells grown in culture that the virus can infect, and then alter or kill. In the case of viral identification, a region of dead cells results from viral growth, and is called a "plaque". Eukaryotic parasites may also be grown in culture as a means of identifying a particular agent.

In the absence of suitable plate culture techniques, some microbes require culture within live animals. Bacteria such as Mycobacterium leprae and T. pallidum can be grown in animals, although serological and microscopic techniques make the use of live animals unnecessary. Viruses are also usually identified using alternatives to growth in culture or animals. Some viruses may be grown in embryonated eggs. Another useful identification method is Xenodiagnosis, or the use of a vector to support the growth of an infectious agent. Chagas disease is the most significant example, because it is difficult to directly demonstrate the presence of the causative agent, Trypanosoma cruzi in a patient, which therefore makes it difficult to definitively make a diagnosis. In this case, xenodiagnosis involves the use of the vector of the Chagas agent T. cruzi, an uninfected triatomine bug, which takes a blood meal from a person suspected of having been infected. The bug is later inspected for growth of T. cruzi within its gut.

Microscopy

Another principal tool in the diagnosis of infectious disease is microscopy. Virtually all of the culture techniques discussed above rely, at some point, on microscopic examination for definitive identification of the infectious agent. Microscopy may be carried out with simple instruments, such as the compound light microscope, or with instruments as complex as an electron microscope. Samples obtained from patients may be viewed directly under the light microscope, and can often rapidly lead to identification. Microscopy is often also used in conjunction with biochemical staining techniques, and can be made exquisitely specific when used in combination with antibody based techniques. For example, the use of antibodies made artificially fluorescent (fluorescently labeled antibodies) can be directed to bind to and identify a specific antigens present on a pathogen. A fluorescence microscope is then used to detect fluorescently labeled antibodies bound to internalized antigens within clinical samples or cultured cells. This technique is especially useful in the diagnosis of viral diseases, where the light microscope is incapable of identifying a virus directly.

Other microscopic procedures may also aid in identifying infectious agents. Almost all cells readily stain with a number of basic dyes due to the electrostatic attraction between negatively charged cellular molecules and the positive charge on the dye. A cell is normally transparent under a microscope, and using a stain increases the contrast of a cell with its background. Staining a cell with a dye such as Giemsa stain or crystal violet allows a microscopist to describe its size, shape, internal and external components and its associations with other cells. The response of bacteria to different staining procedures is used in the taxonomic classification of microbes as well. Two methods, the Gram stain and the acid-fast stain, are the standard approaches used to classify bacteria and to diagnosis of disease. The Gram stain identifies the bacterial groups Firmicutes and Actinobacteria, both of which contain many significant human pathogens. The acid-fast staining procedure identifies the Actinobacterial genera Mycobacterium and Nocardia.

Biochemical tests

Biochemical tests used in the identification of infectious agents include the detection of metabolic or enzymatic products characteristic of a particular infectious agent. Since bacteria ferment carbohydrates in patterns characteristic of their genus and species, the detection of fermentation products is commonly used in bacterial identification. Acids, alcohols and gases are usually detected in these tests when bacteria are grown in selective liquid or solid media.

The isolation of enzymes from infected tissue can also provide the basis of a biochemical diagnosis of an infectious disease. For example, humans can make neither RNA replicases nor reverse transcriptase, and the presence of these enzymes are characteristic of specific types of viral infections. The ability of the viral protein hemagglutinin to bind red blood cells together into a detectable matrix may also be characterized as a biochemical test for viral infection, although strictly speaking hemagglutinin is not an enzyme and has no metabolic function.

Serological methods are highly sensitive, specific and often extremely rapid tests used to identify microorganisms. These tests are based upon the ability of an antibody to bind specifically to an antigen. The antigen, usually a protein or carbohydrate made by an infectious agent, is bound by the antibody. This binding then sets off a chain of events that can be visibly obvious in various ways, dependent upon the test. For example, "Strep throat" is often diagnosed within minutes, and is based on the appearance of antigens made by the causative agent, S. pyogenes, that is retrieved from a patients throat with a cotton swab. Serological tests, if available, are usually the preferred route of identification, however the tests are costly to develop and the reagents used in the test often require refrigeration. Some serological methods are extremely costly, although when commonly used, such as with the "strep test", they can be inexpensive.[1]

Complex serological techniques have been developed into what are known as Immunoassays. Immunoassays can use the basic antibody – antigen binding as the basis to produce an electro - magnetic or particle radiation signal, which can be detected by some form of instrumentation. Signal of unknowns can be compared to that of standards allowing quantitation of the target antigen. To aid in the diagnosis of infectious diseases, immunoassays can detect or measure antigens from either infectious agents or proteins generated by an infected organism in response to a foreign agent. For example, immunoassay A may detect the presence of a surface protein from a virus particle. Immunoassay B on the other hand may detect or measure antibodies produced by an organism’s immune system which are made to neutralize and allow the destruction of the virus.

Instrumentation can be used to read extremely small signals created by secondary reactions linked to the antibody – antigen binding. Instrumentation can control sampling, reagent use, reaction times, signal detection, calculation of results, and data management to yield a cost effective automated process for diagnosis of infectious disease.

Molecular diagnostics

Technologies based upon the polymerase chain reaction (PCR) method will become nearly ubiquitous gold standards of diagnostics of the near future, for several reasons. First, the catalog of infectious agents has grown to the point that virtually all of the significant infectious agents of the human population have been identified. Second, an infectious agent must grow within the human body to cause disease; essentially it must amplify its own nucleic acids in order to cause a disease. This amplification of nucleic acid in infected tissue offers an opportunity to detect the infectious agent by using PCR. Third, the essential tools for directing PCR, primers, are derived from the genomes of infectious agents, and with time those genomes will be known, if they are not already.

Thus, the technological ability to detect any infectious agent rapidly and specifically are currently available. The only remaining blockades to the use of PCR as a standard tool of diagnosis are in its cost and application, neither of which is insurmountable. The diagnosis of a few diseases will not benefit from the development of PCR methods, such as some of the clostridial diseases (tetanus and botulism). These diseases are fundamentally biological poisonings by relatively small numbers of infectious bacteria that produce extremely potent neurotoxins. A significant proliferation of the infectious agent does not occur, this limits the ability of PCR to detect the presence of any bacteria.

Indication of tests

There is usually an indication for a specific identification of an infectious agent only when such identification can aid in the treatment or prevention of the disease, or to advance knowledge of the course of an illness prior to the development of effective therapeutic or preventative measures. For example, in the early 1980s, prior to the appearance of AZT for the treatment of AIDS, the course of the disease was closely followed by monitoring the composition of patient blood samples, even though the outcome would not offer the patient any further treatment options. In part, these studies on the appearance of HIV in specific communities permitted the advancement of hypotheses as to the route of transmission of the virus. By understanding how the disease was transmitted, resources could be targeted to the communities at greatest risk in campaigns aimed at reducing the number of new infections. The specific serological diagnostic identification, and later genotypic or molecular identification, of HIV also enabled the development of hypotheses as to the temporal and geographical origins of the virus, as well as a myriad of other hypothesis.[1] The development of molecular diagnostic tools have enabled physicians and researchers to monitor the efficacy of treatment with anti-retroviral drugs. Molecular diagnostics are now commonly used to identify HIV in healthy people long before the onset of illness and have been used to demonstrate the existence of people who are genetically resistant to HIV infection. Thus, while there still is no cure for AIDS, there is great therapeutic and predictive benefit to identifying the virus and monitoring the virus levels within the blood of infected individuals, both for the patient and for the community at large.

Epidemiology

Disability-adjusted life year for infectious and parasitic diseases per 100,000 inhabitants in 2004.[9]
  no data
  ≤250
  250-500
  500-1000
  1000-2000
  2000-3000
  3000-4000
  4000-5000
  5000-6250
  6250-12500
  12500-25000
  25000-50000
  ≥50000

The World Health Organization collects information on global deaths by International Classification of Disease (ICD) code categories. The following table lists the top infectious disease killers which caused more than 100,000 deaths in 2002 (estimated). 1993 data is included for comparison.

Worldwide mortality due to infectious diseases[10][11]
Rank Cause of death Deaths 2002
(in millions)
Percentage of
all deaths
Deaths 1993
(in millions)
1993 Rank
N/A All infectious diseases 14.7 25.9% 16.4 32.2%
1 Lower respiratory infections[12] 3.9 6.9% 4.1 1
2 HIV/AIDS 2.8 4.9% 0.7 7
3 Diarrheal diseases[13] 1.8 3.2% 3.0 2
4 Tuberculosis (TB) 1.6 2.7% 2.7 3
5 Malaria 1.3 2.2% 2.0 4
6 Measles 0.6 1.1% 1.1 5
7 Pertussis 0.29 0.5% 0.36 7
8 Tetanus 0.21 0.4% 0.15 12
9 Meningitis 0.17 0.3% 0.25 8
10 Syphilis 0.16 0.3% 0.19 11
11 Hepatitis B 0.10 0.2% 0.93 6
12-17 Tropical diseases (6)[14] 0.13 0.2% 0.53 9, 10, 16-18
Note: Other causes of death include maternal and perinatal conditions (5.2%), nutritional deficiencies (0.9%),
noncommunicable conditions (58.8%), and injuries (9.1%).

The top three single agent/disease killers are HIV/AIDS, TB and malaria. While the number of deaths due to nearly every disease have decreased, deaths due to HIV/AIDS have increased fourfold. Childhood diseases include pertussis, poliomyelitis, diphtheria, measles and tetanus. Children also make up a large percentage of lower respiratory and diarrheal deaths.

Historic pandemics

A young Bangladeshi girl infected with smallpox (1973). Due to the development of the smallpox vaccine, the disease was officially eradicated in 1979.

A pandemic (or global epidemic) is a disease that affects people over an extensive geographical area.

  • Plague of Justinian, from 541 to 750, killed between 50% and 60% of Europe's population.[15]
  • The Black Death of 1347 to 1352 killed 25 million in Europe over 5 years (estimated to be between 25 and 50% of the populations of Europe, Asia, and Africa - the world population at the time was 500 million).
  • The introduction of smallpox, measles, and typhus to the areas of Central and South America by European explorers during the 15th and 16th centuries caused pandemics among the native inhabitants. Between 1518 and 1568 disease pandemics are said to have caused the population of Mexico to fall from 20 million to 3 million.[16]
  • The first European influenza epidemic occurred between 1556 and 1560, with an estimated mortality rate of 20%.[16]
  • Smallpox killed an estimated 60 million Europeans during the 18th century[17] (approximately 400,000 per year).[18] Up to 30% of those infected, including 80% of the children under 5 years of age, died from the disease, and one third of the survivors went blind.[19]
  • In the 19th century, tuberculosis killed an estimated one-quarter of the adult population of Europe;[20] by 1918 one in six deaths in France were still caused by TB.
  • The Influenza Pandemic of 1918 (or the Spanish Flu) killed 25-50 million people (about 2% of world population of 1.7 billion).[21] Today Influenza kills about 250,000 to 500,000 worldwide each year.

Emerging diseases

In most cases, microorganisms live in harmony with their hosts via mutual or commensal interactions. Diseases can emerge when existing parasites become pathogenic or when new pathogenic parasites enter a new host.

  1. Coevolution between parasite and host can lead to hosts becoming resistant to the parasites or the parasites may evolve greater virulence, leading to immunopathological disease.
  2. Human activity is involved with many emerging infectious diseases, such as environmental change enabling a parasite to occupy new niches. When that happens, a pathogen that had been confined to a remote habitat has a wider distribution and possibly a new host organism. Parasites jumping from nonhuman to human hosts are known as zoonoses. Under disease invasion, when a parasite invades a new host species, it may become pathogenic in the new host.[22]

Several human activities have led to the emergence and spread of new diseases,[22] see also Globalization and Disease and Wildlife disease:

  • Encroachment on wildlife habitats. The construction of new villages and housing developments in rural areas force animals to live in dense populations, creating opportunities for microbes to mutate and emerge.[23]
  • Changes in agriculture. The introduction of new crops attracts new crop pests and the microbes they carry to farming communities, exposing people to unfamiliar diseases.
  • The destruction of rain forests. As countries make use of their rain forests, by building roads through forests and clearing areas for settlement or commercial ventures, people encounter insects and other animals harboring previously unknown microorganisms.
  • Uncontrolled urbanization. The rapid growth of cities in many developing countries tends to concentrate large numbers of people into crowded areas with poor sanitation. These conditions foster transmission of contagious diseases.
  • Modern transport. Ships and other cargo carriers often harbor unintended "passengers", that can spread diseases to faraway destinations. While with international jet-airplane travel, people infected with a disease can carry it to distant lands, or home to their families, before their first symptoms appear.

History

East German postage stamps depicting four antique microscopes. Advancements in microscopy were essential to the early study of infectious diseases.

Ideas of contagion became more popular in Europe during the Renaissance, particularly through the writing of the Italian physician Girolamo Fracastoro.[24]

Anton van Leeuwenhoek (1632–1723) advanced the science of microscopy by being the first to observe microorganisms, allowing for easy visualization of bacteria.

In the mid-19th century John Snow and William Budd did important work demonstrating the contagiousness of typhoid and cholera through contaminated water. Both are credited with decreasing epidemics of cholera in their towns by implementing measures to prevent contamination of water.[25]

Louis Pasteur proved way beyond doubt that certain diseases are caused by infectious agents, and developed a vaccine for rabies.

Robert Koch, provided the study of infectious diseases with a scientific basis known as Koch's postulates.

Edward Jenner, Jonas Salk and Albert Sabin developed effective vaccines for smallpox and polio, which would later result in the eradication and near-eradication of these diseases, respectively.

Alexander Fleming discovered the world's first antibiotic Penicillin which Florey and Chain then developed.

Gerhard Domagk developed sulphonamides, the first broad spectrum synthetic antibacterial drugs.

Medical specialists

The medical treatment of infectious diseases falls into the medical field of Infectiology and in some cases the study of propagation pertains to the field of Epidemiology. Generally, infections are initially diagnosed by primary care physicians or internal medicine specialists. For example, an "uncomplicated" pneumonia will generally be treated by the internist or the pulmonologist (lung physician).The work of the infectiologist therefore entails working with both patients and general practitioners, as well as laboratory scientists, immunologists, bacteriologists and other specialists.

An infectious disease team may be alerted when:

Society and culture

A number of studies have reported associations between pathogen load in an area and human behavior. Higher pathogen load is associated with decreased size of ethnic and religious groups in an area. This may be due high pathogen load favoring avoidance other groups which may reduce pathogen transmission or a high pathogen load preventing the creation of large settlements and armies which enforce a common culture. Higher pathogen load is also associated with more restricted sexual behavior which may reduce pathogen transmission. It also associated with higher preferences for health and attractiveness in mates. Higher fertility rates and shorter or less parental care per child is another association which may be a compensation for the higher mortality rate. There is also an association with polygyny which may be due to higher pathogen load making selecting males with a high genetic resistance increasingly important. Higher pathogen load is also associated with more collectivism and less individualism which may limit contacts with outside groups and infections. There are alternative explanations for at least some of the associations although some of these explanations may in turn ultimately be due to pathogen load. Thus, polygny may also be due to a lower male:female ratio in these areas but this may ultimately be due to male infants having increased mortality from infectious diseases. Another example is that poor socioeconomic factors may ultimately in part be due to high pathogen load preventing economic development.[26]

See also

Notes and references

  1. ^ a b c d e f g h Ryan KJ; Ray CG (editors) (2004). Sherris Medical Microbiology (4th ed.). McGraw Hill. ISBN 0-8385-8529-9. 
  2. ^ "Glossary of Notifiable Conditions". Washington State Department of Health. http://www.doh.wa.gov/notify/other/glossary.htm. Retrieved 2010-02-03. 
  3. ^ a b This section incorporates public domain materials included in the text: Medical Microbiology Fourth Edition: Chapter 8 (1996) . Baron, Samuel MD. The University of Texas Medical Branch at Galveston.
  4. ^ a b Watts, Duncan (2003). Six degrees: the science of a connected age. London: William Heinemann. ISBN 0-393-04142-5. 
  5. ^ Preston, Richard (1995). The hot zone. Garden City, N.Y.: Anchor Books. ISBN 0-385-49522-6. 
  6. ^ Ferguson NM, Donnelly CA, Anderson RM (May 2001). "The foot-and-mouth epidemic in Great Britain: pattern of spread and impact of interventions". Science 292 (5519): 1155–60. doi:10.1126/science.1061020. PMID 11303090. http://www.sciencemag.org/cgi/pmidlookup?view=long&pmid=11303090. 
  7. ^ Ge D, Fellay J, Thompson AJ et al (2009). "Genetic variation in IL28B predicts hepatitis C treatment-induced viral clearance". Nature 461 (7262): 399–401. doi:10.1038/nature08309. PMID 19684573. 
  8. ^ Thomas DL, Thio CL, Martin MP et al (2009). "Genetic variation in IL28B and spontaneous clearance of hepatitis C virus". Nature 461 (7265): 798–801. doi:10.1038/nature08463. PMC 3172006. PMID 19759533. http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3172006. 
  9. ^ World Health Organization (February 2009). "Age-standardized DALYs per 100,000 by cause, and Member State, 2004". http://www.who.int/entity/healthinfo/global_burden_disease/gbddeathdalycountryestimates2004.xls. 
  10. ^ "The World Health Report (Annex Table 2)" (PDF). 2004. http://www.who.int/whr/2004/annex/topic/en/annex_2_en.pdf. 
  11. ^ "Table 5" (PDF). 1995. http://www.who.int/whr/1995/en/whr95_ch1_en.pdf. 
  12. ^ Lower respiratory infections include various pneumonias, influenzas and acute bronchitis.
  13. ^ Diarrheal diseases are caused by many different organisms, including cholera, botulism, and E. coli to name a few. See also: Intestinal infectious diseases
  14. ^ Tropical diseases include Chagas disease, dengue fever, lymphatic filariasis, leishmaniasis, onchocerciasis, schistosomiasis and trypanosomiasis.
  15. ^ Infectious and Epidemic Disease in History
  16. ^ a b Dobson, Andrew P. and E. Robin Carter (1996) Infectious Diseases and Human Population History (full-text pdf) Bioscience;46 2.
  17. ^ Smallpox. North Carolina Digital History.
  18. ^ Smallpox and Vaccinia. National Center for Biotechnology Information.
  19. ^ Smallpox: The Triumph over the Most Terrible of the Ministers of Death
  20. ^ Multidrug-Resistant Tuberculosis. Centers for Disease Control and Prevention.
  21. ^ Influenza of 1918 (Spanish Flu) and the US Navy
  22. ^ a b Krauss H, Weber A, Appel M (2003). Zoonoses: Infectious Diseases Transmissible from Animals to Humans (3rd ed.). Washington, D.C.: ASM Press. ISBN 1-55581-236-8. 
  23. ^ Daszak et al.: Emerging Infectious Diseases of Wildlife-- Threats to Biodiversity and Human Health., USA 2000
  24. ^ Beretta M (2003). "The revival of Lucretian atomism and contagious diseases during the renaissance". Medicina nei secoli 15 (2): 129–54. PMID 15309812. 
  25. ^ Robert Moorhead, "William Budd and typhoid fever". Retrieved March 7, 2010. J R Soc Med. 2002 November; 95(11): 561–564.
  26. ^ Nettle, D. (2009). "Ecological influences on human behavioural diversity: A review of recent findings". Trends in Ecology & Evolution 24 (11): 618–611. doi:10.1016/j.tree.2009.05.013.  edit

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