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lysozyme

 
Dictionary: ly·so·zyme   ('sə-zīm') pronunciation
n.
An enzyme occurring naturally in egg white, human tears, saliva, and other body fluids, capable of destroying the cell walls of certain bacteria and thereby acting as a mild antiseptic.


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Sci-Tech Encyclopedia: Lysozyme
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An enyme that was first identified and named by Alexander Fleming, who recognized its bacteriolytic properties. It has been designated muramidase, since it is known to facilitate the hydrolysis of a β-1-4-glycosidic bond between N-acetylglucosamine and N-acetylmuramic acid in bacterial cell walls; it also hydrolyzes similar glycosidic bonds in fragments of chitin. The most detailed studies have been performed on hen egg-white lysozyme, because this product is readily available. However, enzymes possessing lysozyme activity have been found in bacteria, bacteriophages, and plants and in human leukocytes, nasal secretions, saliva, and tears. The three-dimensional structure of the protein has been defined by x-ray crystallography. Additional data are available for the amino acid sequence of human lysozyme and also for a bacteriophage lysozyme. These results have given rise to speculation concerning the origin of the lysozyme gene during evolution.

Certain enzyme functions appear to be widely distributed in nature. The amino acid sequences of proteins possessing these functions reflect changes that have occurred in the course of evolution. The structures of lysozymes from three sources, distant in evolution, have been carefully examined. Hen egg lysozyme has no structural elements in common with bacteriophage lysozyme. Thus it must be concluded that these two enzymes emerged in evolution completely independent of each other. Preliminary studies of the structure of human lysozyme reveal considerable similarity to the structure of hen egg lysozyme. In fact, the resemblance is so great that it can be concluded that these proteins evolved from the same gene and have an essentially identical mechanism of action.

The amino acid composition of α-lactalbumin, a protein in cow's milk, is quite similar to that of hen egg lysozyme; nearly half of the amino acid positions in these two proteins are identical. It is postulated from a comparison of the amino acid sequences of hen egg lysozyme, human lysozyme, and α-lactalbumin that a “deletion” occurred during evolution in the α-lactalbumin gene with a resulting loss of information for two amino acids near position 13. In addition, positions 10, 12, and 19 in human lysozyme and α-lactalbumin are identical, so it is possible to see remnants of a common ancestral gene in all three proteins. These data illustrate the manner in which amino acid sequence information is being used as a molecular reflection of the paths of evolution. See also Enzyme; Proteins, evolution of.


Dental Dictionary: lysozyme
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(lī'sōzîm)
n

An enzyme in major salivary secretions that may rupture bacterial cell walls and may regulate the oral flora.

Veterinary Dictionary: lysozyme
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lyso—lyses bacteria; zyme—an enzyme naturally present in body fluids but ordinarily obtained from egg white for in vitro work. It hydrolyzes a specific glycoside bond in the peptidoglycan that forms bacterial cell walls, yielding the disaccharide N-acetylglucosamine-N-acetylmuramate. An important component of innate resistance.

Wikipedia: Lysozyme
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Lysozyme
Identifiers
EC number 3.2.1.17
CAS number 9001-63-2
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures
Gene Ontology AmiGO / EGO
edit
Lysozyme
Lysozyme.png
PDB rendering based on 132l.
Available structures
133l, 134l, 1b5u, 1b5v, 1b5w, 1b5x, 1b5y, 1b5z, 1b7l, 1b7m, 1b7n, 1b7o, 1b7p, 1b7q, 1b7r, 1b7s, 1bb3, 1bb4, 1bb5, 1c43, 1c45, 1c46, 1c7p, 1cj6, 1cj7, 1cj8, 1cj9, 1ckc, 1ckd, 1ckf, 1ckg, 1ckh, 1d6p, 1d6q, 1di3, 1di4, 1di5, 1eq4, 1eq5, 1eqe, 1gay, 1gaz, 1gb0, 1gb2, 1gb3, 1gb5, 1gb6, 1gb7, 1gb8, 1gb9, 1gbo, 1gbw, 1gbx, 1gby, 1gbz, 1gdw, 1gdx, 1ge0, 1ge1, 1ge2, 1ge3, 1ge4, 1gev, 1gez, 1gf0, 1gf3, 1gf4, 1gf5, 1gf6, 1gf7, 1gf8, 1gf9, 1gfa, 1gfe, 1gfg, 1gfh, 1gfj, 1gfk, 1gfr, 1gft, 1gfu, 1gfv, 1hnl, 1i1z, 1i20, 1i22, 1inu, 1ioc, 1ip1, 1ip2, 1ip3, 1ip4, 1ip5, 1ip6, 1ip7, 1iwt, 1iwu, 1iwv, 1iww, 1iwx, 1iwy, 1iwz, 1ix0, 1iy3, 1iy4, 1jka, 1jkb, 1jkc, 1jkd, 1jsf, 1jwr, 1laa, 1lhh, 1lhi, 1lhj, 1lhk, 1lhl, 1lhm, 1lmt, 1loz, 1lyy, 1lz1, 1lz4, 1lz5, 1lz6, 1lzr, 1lzs, 1op9, 1oua, 1oub, 1ouc, 1oud, 1oue, 1ouf, 1oug, 1ouh, 1oui, 1ouj, 1qsw, 1re2, 1rem, 1rex, 1rey, 1rez, 1tay, 1tby, 1tcy, 1tdy, 1ubz, 1w08, 1wqm, 1wqn, 1wqo, 1wqp, 1wqq, 1wqr, 1yam, 1yan, 1yao, 1yap, 1yaq, 207l, 208l, 2bqa, 2bqb, 2bqc, 2bqd, 2bqe, 2bqf, 2bqg, 2bqh, 2bqi, 2bqj, 2bqk, 2bql, 2bqm, 2bqn, 2bqo, 2hea, 2heb, 2hec, 2hed, 2hee, 2hef, 2lhm, 2mea, 2meb, 2mec, 2med, 2mee, 2mef, 2meg, 2meh, 2mei, 2nwd, 3exd, 3lhm
Identifiers
Symbols LYZ;
External IDs OMIM153450 MGI96897 HomoloGene37278
EC number 3.2.1.17
RNA expression pattern
PBB GE LYZ 213975 s at tn.png
More reference expression data
Orthologs
Species Human Mouse
Entrez 4069 17105
Ensembl ENSG00000090382 ENSMUSG00000069516
UniProt P61626 Q3TXG2
RefSeq NM_000239 (mRNA) NM_017372 (mRNA)
NP_000230 (protein) NP_059068 (protein)
Location Chr 12:
68.03 - 68.03 Mb
Chr 10:
116.68 - 116.69 Mb
PubMed search [1] [2]
Lysozyme single crystal.

Lysozyme, also known as muramidase or N-acetylmuramide glycanhydrolase, are a family of enzymes (EC 3.2.1.17) which damage bacterial cell walls by catalyzing hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. Lysozyme is abundant in a number of secretions, such as tears, saliva, human milk and mucus. It is also present in cytoplasmic granules of the polymorphonuclear neutrophils (PMN). Large amounts of lysozyme can be found in egg white. C-type lysozymes are closely related to alpha-lactalbumin in sequence and structure making them part of the same family.

In humans, the lysozyme enzyme is encoded by the LYZ gene.[1][2]

Contents

Function

The enzyme functions by attacking peptidoglycans (found in the cell walls of bacteria, especially Gram-positive bacteria) and hydrolyzing the glycosidic bond that connects N-acetylmuramic acid with the fourth carbon atom of N-acetylglucosamine. It does this by binding to the peptidoglycan molecule in the binding site within the prominent cleft between its two domains. This causes the substrate molecule to adopt a strained conformation similar to that of the transition state[citation needed]. According to Phillips-Mechanism, the lysozyme binds to a hexasaccharide. The lysozyme then distorts the 4th sugar in hexasaccharide (the D ring) into a half-chair conformation. In this stressed state the glycosidic bond is easily broken.

The amino acid side chains glutamic acid 35 (Glu35) and aspartate 52 (Asp52) have been found to be critical to the activity of this enzyme. Glu35 acts as a proton donor to the glycosidic bond, cleaving the C-O bond in the substrate, whilst Asp52 acts as a nucleophile to generate a glycosyl enzyme intermediate. The glycosyl enzyme intermediate then reacts with a water molecule, to give the product of hydrolysis and leaving the enzyme unchanged.

Role in disease

Lysozyme is part of the innate immune system. Children fed infant formula lack lysozyme in their diet and have three times the rate of diarrheal disease.[citation needed] Since lysozyme is a natural form of protection from pathogens like Salmonella, E.coli and Pseudomonas, when it is deficient due to infant formula feeding, can lead to increased incidence of disease.

Whereas the skin is a protective barrier due to its dryness and acidity, the conjunctiva (membrane covering the eye) is instead protected by secreted enzymes, mainly lysozyme and defensin. However, when these protective barriers fail, conjunctivitis results.

History

Alexander Fleming (1881-1955), the discoverer of penicillin, described lysozyme in 1922.[3]

Its structure was described by David Chilton Phillips (1924-1999) in 1965 when he got the first 2 Ångström (200 pm) resolution image.[4][5] This work led Phillips to provide an explanation for how enzymes speed up a chemical reaction in terms of its physical structures. The original mechanism proposed by Phillips was more recently revised.[6]

Howard Florey (1898-1968) and Ernst B. Chain (1906-1979) also investigated lysozymes. Although they never made much progress in this field, they along with Fleming developed penicillin.

References

  1. ^ Yoshimura K, Toibana A, Nakahama K (January 1988). "Human lysozyme: sequencing of a cDNA, and expression and secretion by Saccharomyces cerevisiae". Biochem. Biophys. Res. Commun. 150 (2): 794–801. doi:10.1016/0006-291X(88)90461-5. PMID 2829884. 
  2. ^ Peters CW, Kruse U, Pollwein R, Grzeschik KH, Sippel AE (July 1989). "The human lysozyme gene. Sequence organization and chromosomal localization". Eur. J. Biochem. 182 (3): 507–16. doi:10.1111/j.1432-1033.1989.tb14857.x. PMID 2546758. 
  3. ^ Fleming A (01 May 1922). "On a remarkable bacteriolytic element found in tissues and secretions". Proc Roy Soc Ser B 93 (653): 306–317. doi:10.1098/rspb.1922.0023. http://www.jstor.org/pss/80959. 
  4. ^ Blake CC, Koenig DF, Mair GA, North AC, Phillips DC, Sarma VR. (1965). "Structure of hen egg-white lysozyme. A three-dimensional Fourier synthesis at 2 Angstrom resolution". Nature 206 (986): 757–61. doi:10.1038/35090602. PMID 5891407. 
  5. ^ Johnson LN, Phillips DC. (1965). "Structure of some crystalline lysozyme-inhibitor complexes determined by X-ray analysis at 6 Angstrom resolution". Nature 206 (986): 761–3. doi:10.1038/206761a0. PMID 5840126. 
  6. ^ Vocadlo DJ, Davies GJ, Laine R, Withers SG. (2001). "Catalysis by hen egg-white lysozyme proceeds via a covalent intermediate". Nature 412 (6849): 835–8. doi:10.1038/35090602. PMID 11518970. 

See also

External links



 
 

 

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Dictionary. The American Heritage® Dictionary of the English Language, Fourth Edition Copyright © 2007, 2000 by Houghton Mifflin Company. Updated in 2009. Published by Houghton Mifflin Company. All rights reserved.  Read more
Sci-Tech Encyclopedia. McGraw-Hill Encyclopedia of Science and Technology. Copyright © 2005 by The McGraw-Hill Companies, Inc. All rights reserved.  Read more
Dental Dictionary. Mosby's Dental Dictionary. Copyright © 2004 by Elsevier, Inc. All rights reserved.  Read more
Veterinary Dictionary. Saunders Comprehensive Veterinary Dictionary 3rd Edition. Copyright © 2007 by D.C. Blood, V.P. Studdert and C.C. Gay, Elsevier. All rights reserved.  Read more
Wikipedia. This article is licensed under the Creative Commons Attribution/Share-Alike License. It uses material from the Wikipedia article "Lysozyme" Read more