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Repeated sequence

 
Science Dictionary: repetitive DNA

Stretches of DNA that repeat themselves throughout a genome, either in tandem or interspersed along the genome. These stretches can comprise up to fifty percent or more of an organism's DNA. It can code for an end product, perhaps a certain enzyme that is needed in large numbers; it can have a structural function (such as a telomere); or it can comprise sequences with no known function.

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Wikipedia: Repeated sequence (DNA)
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In the study of DNA sequences, one can distinguish two main types of repeated sequence:

The majority of LINEs are LINE-1 and the majority of SINEs are ALUs.

In prokaryotes, CRISPR are arrays of alternating repeats and spacers.

Contents

Other types of repeats

Note: The following are covered in detail in "Computing for Comparative Microbial Genomics"[1].

  • direct repeats
    • global direct repeat
    • local direct simple repeats
    • local direct repeats
    • local direct repeats with spacer
  • inverted repeats
    • global inverted repeat
    • local inverted repeat
    • inverted repeat with spacer
    • palindromic repeat
  • mirror and everted repeats


See also

References

  1. ^ Ussery, David W.; Wassenaar, Trudy; Borini, Stefano (2008-12-22). "Word Frequencies, Repeats, and Repeat-related Structures in Bacterial Genomes". Computing for Comparative Microbial Genomics: Bioinformatics for Microbiologists. Computational Biology. 8 (1 ed.). Springer. p. 133-144. ISBN 978-1-84800-254-8. 

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Science Dictionary. The New Dictionary of Cultural Literacy, Third Edition Edited by E.D. Hirsch, Jr., Joseph F. Kett, and James Trefil. Copyright © 2002 by Houghton Mifflin Company. Published by Houghton Mifflin. All rights reserved.  Read more
Wikipedia. This article is licensed under the Creative Commons Attribution/Share-Alike License. It uses material from the Wikipedia article "Repeated sequence (DNA)" Read more