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Pokemon Ruby Sapphire and Emerald
Pokemon Diamond Pearl and Platinum

Can you restart Pokemon emerald without losing your legendaries?



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No, you cannot.

The only way to keep Pokemon when you restart is for you to trade it onto another game, then trade it back onto yours when you need it.

If you are restarting and you follow my method, then you should trade on Pokemon that have been purposely caught for that, like easily replaceable Pokemon that are common.

For example: Zigzagoon, Wingull, and many others.