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Meriwether Lewis who had been appointed to the rank of Captain, was designated as the expedition "scientist". Prior to the expedition, Lewis went to Philadelphia for intense training by physician Benjamin Rush, astronomer-surveyor Andrew Ellicott, botanist Benjamin Barton, anatomist Casper Wister, and mathematician Robert Patterson. For three months he was tutored in the spring of 1803.

The skills that Lewis learned would be passed on to Clark as they traveled. Prior to the expedition, Clark was in fact Lewis' superior officer and was very experienced in handling boats. Clark had rounded up some men from the mountains to help on the expedition.

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