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∙ 12y agoBacteroides fragilis typically has seven copies of the 16S rRNA gene in its genome. Each copy of this gene plays a crucial role in the identification and classification of the bacterium.
16S rRNA is highly conserved among different organisms because it plays a critical role in the structure and function of the ribosome, which is essential for protein synthesis. Mutations in the 16S rRNA gene can disrupt ribosome function, leading to impaired protein synthesis and cell death. As a result, natural selection favors the conservation of the 16S rRNA sequence to maintain the overall efficiency and accuracy of translation in all living organisms.
Biologists consider an organism's physical characteristics, genetics, and evolutionary history when classifying it into a specific group or category. These factors help determine an organism's relationships with other species and its place in the overall classification system.
Mitochondrial DNA codes for certain proteins that are essential for the function of the mitochondria, the cell's powerhouse. It also contains genes involved in energy production through oxidative phosphorylation. Mitochondrial DNA is separate from the nuclear DNA and is passed down maternally.
The Shine-Dalgarno sequence is a ribosomal binding site found in bacterial messenger RNA. It helps the ribosome locate the start codon and initiate protein translation during protein synthesis. By base pairing with the 16S rRNA of the small ribosomal subunit, the Shine-Dalgarno sequence ensures accurate positioning of the ribosome on the mRNA.
To identify or classify archaea or eubacteria, you would typically perform molecular sequencing of specific genes, such as the 16S rRNA gene. This gene provides a phylogenetic marker and can help determine the evolutionary relationships between different microorganisms. Additionally, you can use biochemical tests and culture methods to further characterize the unique metabolic and physiological traits of these organisms.
Yes, plasmid DNA can be used as a template for 16S rRNA amplification. The plasmid would need to contain the 16S rRNA gene sequence of interest. By designing primers that target the 16S rRNA gene region on the plasmid, PCR amplification can be performed to specifically amplify the 16S rRNA gene.
16S rRNA is highly conserved among different organisms because it plays a critical role in the structure and function of the ribosome, which is essential for protein synthesis. Mutations in the 16S rRNA gene can disrupt ribosome function, leading to impaired protein synthesis and cell death. As a result, natural selection favors the conservation of the 16S rRNA sequence to maintain the overall efficiency and accuracy of translation in all living organisms.
Ribosomal 16S RNA found in the bacteria and small microorganisms prokaryotic cells and the subunit is 30S.
Macrogen provides services such as standerd genetic sequencing. They also offer 16s rRNA full sequencing, microsatellite anlysis and difficult template sequencing.
16
6
4
16s + 4s = 20s
10 x 16 = 160
For identification of bacteria, 16S rRNA gene sequencing has been done for several years. Problems with it are sequences in some databases are not accurate, there is no consensus quantitative definition of genus or species based on 16S rRNA gene sequence data, the proliferation of species names based on minimal genetic and phenotypic differences raises communication difficulties, and microheterogeneity in 16S rRNA gene sequence within a species is common. Despite its accuracy, 16S rRNA gene sequence analysis lacks widespread use beyond the large and reference laboratories because of technical and cost considerations. An alternative to this is FATTY ACID PROFILING. It means the entire fatty acid composition of the particular organism is determined and this information is used for its identification. In this method, the bacteria are cultured and their Cellular lipids were saponified, and the fatty acids were methylated, extracted and purified by simple single tube method. The resulting fatty acid methyl esters were separated, identified and quantified by computer controlled automated gas chromatography using a software library of known fatty acid methyl esters. Profiles thus obtained are now used for identification of bacteria. The composition of fatty acids varies at generic as well as specific levels, also varies with culture conditions. fatty acid profile is unique for a particular organism, thus making it easy to identify. For identification of bacteria, 16S rRNA gene sequencing has been done for several years. Problems with it are sequences in some databases are not accurate, there is no consensus quantitative definition of genus or species based on 16S rRNA gene sequence data, the proliferation of species names based on minimal genetic and phenotypic differences raises communication difficulties, and microheterogeneity in 16S rRNA gene sequence within a species is common. Despite its accuracy, 16S rRNA gene sequence analysis lacks widespread use beyond the large and reference laboratories because of technical and cost considerations. An alternative to this is FATTY ACID PROFILING. It means the entire fatty acid composition of the particular organism is determined and this information is used for its identification. In this method, the bacteria are cultured and their Cellular lipids were saponified, and the fatty acids were methylated, extracted and purified by simple single tube method. The resulting fatty acid methyl esters were separated, identified and quantified by computer controlled automated gas chromatography using a software library of known fatty acid methyl esters. Profiles thus obtained are now used for identification of bacteria. The composition of fatty acids varies at generic as well as specific levels, also varies with culture conditions. fatty acid profile is unique for a particular organism, thus making it easy to identify.
5.25 x 16 = 84
62 times with a remainder of 8 or 62.5 times