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Formamide lowers the melting point of nucleic acids so that the strands separate more readily. DNA is normally more stable in a double-stranded structure (even if every base isn't complementary) and less stable when single-stranded, so formamide must increase the stability of single-strandedness. In in situ hybridization, an RNA probe binds to mRNA that is already single-stranded. mRNA does not gain any stability by being a hybrid unless the probe is specific and can bind properly, thus increasing stability. For example, in the presence of formamide, a U nucleotide would rather bind to an A than nothing (binding to specific probe is better than staying single stranded), but a U nucleotide would rather bind to nothing than a G (binding to non specific probe is worse than binding to nothing). https://www.roche-applied-science.com/PROD_INF/MANUALS/InSitu/pdf/ISH_33-37.pdf

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Q: What does formamide do in hybridization buffers?
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