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In coomassie staining, a dye binds to all proteins, visualizing all of them. In this way, it's nonspecific. The dye diffuses into the the original gel.

In a western, an antibody binds specifically to one or more proteins, making it specific for proteins to which the antibody can bind. In order for the antibody to access the proteins from the original gel, they are moved (blotted) to the surface of a membrane (usually nitrocellulose).

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Difference between silver stain and coomassie?

coomassie brilliant blue dye is a linear dye whereas the silver stain dye is a nonlinear one. Besides that coomassie dye has a lower sensitivity and is used for detection of highly abundant proteins. Silver stain relies on adsorption rather than absorption and is more suitable for detection of low abundant proteins but with a higher sensitivity.


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