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There is no 'part' of a molecule as such. But the molecule which is used to store and transport energy in the short term within cells and organisms is Adenosine Triphosphate (ATP). ATP is broken down into one molecule of inorganic phosphate and a molecule of adenosine diphosphate (ADP), the energy released from this bond is captured and used to drive most cellular processes. On a larger scale, some form of carbohydrate or triglyceride is used to generate the ATP in the first place (i.e. glucose, glycogen, etc.) depending upon you particular species and needs at the time.

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