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There should be equal probability (at least over time) of the molecule being in either flask (as long as you don't have to account for the possibility of it being in a region connecting the two flasks but belonging to neither). Thus the probability is 50% it's in A and 50% it's in B.

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Q: Two equal sized flasks are connected with one molecule inside what is the probability that the molecule will be in flask A What is the probability it will be in flask B?
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