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The same way as any other distributions from your IRA accounts using the information from the 1099-R Gross amount and taxable amount and the taxable amount is added to all of your gross income and taxed at your marginal tax rate.

When you have an IRA with after income tax dollars you are supposed to have a cost basis and also have the forms 8606 for each year that you made these after income contributions and that will be where you will have to get your information from to determine our cost basis that you would recover free of income tax over a period of years.

Form 8606

To designate contributions as nondeductible, you must file Form 8606.

Nondeductible Contributions

Failure to report nondeductible contributions

If you do not report nondeductible contributions, all of the contributions to your traditional IRA will be treated as deductible contributions when withdrawn. All distributions from your IRA will be taxed unless you can show, with satisfactory evidence, that nondeductible contributions were made.

Go to the IRS.gov web site and use the search box for Publication 17 (2009), Your Federal Income Tax go to chapter 17 Individual Retirement Arrangements (IRAs)

Click on the below Related Link

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Q: How do you determine Federal taxes due upon taking a normal distribution from an indexed equity IRA that you funded with IRAs which you purchased with after tax dollars?
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