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There are many possible variables to this scenario. One variable is the habitat; maybe where they were born, were more natural predators to the rabbit. Another possibility is prematural care. Maybe the rabbit ate something bad and caused the offspring to be medically unstable. Also maybe the rabbit has a genetic disease and this was just a bad litter. Some animals even have more babies than they know will grow up to survive to adulthood to ensure that a few of their offspring will survive. You will find this with tons of animals, fish and turtles for example. In captivity though, it is simply natural selection and chance. This is like asking the same thing about humans. How come only 8 out of her 10 kids survived? We may not know. It could be anything above or they just weren't the sharpest knives in the box.

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Q: A female rabbit had five offspring in one litter Two of the five baby rabbits were able to survive into adulthood Why are some animals more likely to survive to adulthood than other animals?
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