there are;
1. RT PCR - helps in making complementary DNA with the help of mRNA.
2.anchored PCR - helps in making the DNA whose sequence is unknown.
types of pcr: AFLP -PCR. Allele-specific PCR. Alu-PCR. Assembly -PCR. Assemetric -PCR. Colony -PCR. Helicase dependent amplification. Hot start pCR. Inverse -PCR. Insitu -pCR. ISSR-PCR. RT-PCR(REVERSE TARNSCRIPTASE). REAL TIME -PCR
PCR is a biotechnological method to amplify your gene (DNA) of your interest. It produce millions of your DNA fragments hence used in cloning. There are variants of this method using the same thermocycling principle such as touch down PCR, gradient PCR, RFLP, multiplex PCR, Q PCR, RT PCR and so on.
Some common questions that researchers often encounter about PCR include: How does PCR work? What are the different types of PCR techniques? What are the limitations of PCR? How can PCR results be validated? How can PCR be optimized for better results? What are the potential sources of error in PCR? How can PCR be used in different research applications? What are the ethical considerations when using PCR in research? How can PCR be used in clinical diagnostics? What are the current advancements in PCR technology?
Observing no bands on gel electrophoresis after PCR amplification indicates that the target DNA sequence was not successfully amplified. This could be due to issues such as primer design, PCR conditions, or the quality of the DNA sample. It is important to troubleshoot and optimize the PCR reaction to ensure successful amplification of the desired DNA fragment.
The GC clamp in PCR amplification is important because it helps improve the specificity and efficiency of the reaction by stabilizing the DNA strands and preventing non-specific binding. This can lead to more accurate and reliable results in the amplification process.
The use of dNTP is PCR and multiplex PCR
Difference between real time PCR and reverse transcription PCR is as follows:- 1. Real time PCR is donated as qPCR and on the other hand reverse transcription PCR is denoted as RT-PCR. 2. In qPCR, the template used is single strand DNA strand whereas in the RT-PCR, the template used in process is single strand of RNA. 3. The real time PCR enables both quantification as well as detection of the DNA in the real time whereas the RT-PCR enables only the quantification of the RNA and it is little bit slower process then the qPCR as it first produce the cDNA from the template RNA strand and then process it in the similar fashion as the traditional PCR.
Nested PCR is a variation of regular PCR that involves two rounds of amplification. It is often used when the target DNA is present in low concentrations. Nested PCR can increase the sensitivity and specificity of the test compared to regular PCR. Regular PCR, on the other hand, involves a single round of amplification and is commonly used for routine DNA amplification. Nested PCR is advantageous in detecting low abundance targets, while regular PCR is more suitable for general DNA amplification purposes.
PCR assays can be both qualitative and quantitative, depending on the method used. Qualitative PCR, often referred to as conventional PCR, detects the presence or absence of a specific DNA sequence. In contrast, quantitative PCR (qPCR or real-time PCR) measures the amount of DNA, providing information on the quantity of the target sequence in a sample. Thus, PCR can serve both purposes based on the specific assay design.
In qualitative PCR specific DNA fragment is detected while in quantitative PCR our target DNA sequence not only is detected but its amount is determined (after reaction we can calculate the amount of DNA we had in our sample)
Using nested primers in PCR amplification allows for increased specificity and sensitivity in detecting the target DNA sequence. This is because the nested primers bind to different regions of the target sequence, resulting in a more accurate and efficient amplification process.
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