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On the undergrad level, this question is irrelevant. On the graduate level, you are specializing in a certain taxonomic group or area (embryology, physiology etc.), so this question is somewhat vague.

The current trend is away from zoology programs. Most have been cut or merged into biology programs. Your best bet would probably be to find a strong ecology program in your area of interest. There are a few strong zoology grad programs remaining- Michigan State, Cornell, U Hawaii, NC State, Miami U, TAMU, Oregon State, U Oklahoma, U Florida, U Maine, UNH, Wisconsin, Washington, and U British Columbia are a few I know of. Many marine science programs offer invertebrate zoology.

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