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Main Relay Assembly in 99 Civics are located in the right side (passenger side forleft hand drive cars) just below the aircon vent.you have to take off the glove box it is just above the ECU. usually color gray case. to tae it off,remove the right hand panel of your dash,it has 1 screw and the rest is just clips. you can unbolt the main relay from that side.

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Q: Where is the main relay located at on a 99 Honda Civic ex?
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