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a box and a chamber and a lid and a comb

A gel electrophoresis can be made two different ways---horizontal or vertical. I'm doing a project with it right now, and honestly, I prefer the horizontal. I don't know how the vertical works, but the horizontal is pretty much a box inside a box with the lid and comb. The bigger box, or your chamber, should be large enough to fit all the wiring on each ends of it, and the smaller box, or the box, in the middle. Your box should have two removable walls on the ends in which the wells are facing, and slits on one end for the comb to go into. You should put the comb in and fill the box up with the gel, and when it dries, you take the comb out and take off both walls. The charge can then run through the walls and to the other side of the chamber.

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What is the purpose of gel electrophoresis?

The buffer is the medium through which the current flows. In the electrophoresis chamber, the anode and cathode are separated and the gel is placed between them. In order to close the circuit and generate the voltage which causes the migration, the entire chamber is filled with a conductive buffer. It is actually possible to perform electrophoresis without a buffer; however this requires a specially made electrophoresis chamber. In these chambers the electrodes actually contact the top and bottom of the gel eliminating the need for a conductive buffer to close the circuit.SDS PAGE electrophoresis uses buffer not primarily as a conductor but for holding a desired pH, dissipating heat and providing SDS in excess in the case of denaturing gels. A gel would run without a buffer as the gel itself is a conductor but the currents involved would heat it to the point of decomposition. Also the volume of liquid in a gel does not allow for an adequate pH buffering system. Holding a pH is extremely important for reproducibility especially in native gels as the pH can change the charge on the peptide. It is true some gels do not require buffer but these are rare cases like isoelectric focusing.the primary application of the buffer would be to conduct electricity,to form a closed circuit


Do anodes have a positive electricity charge?

The "anode" is usually considered to be "negative". However in some experiments such as Gel Electrophoresis the anode is positive.


What is the reason for not getting DNA bands after electrophoresis?

A few reasons you may not see bands on the gel after electrophoresis:DNA concentration too low. More sample has to be loadedDNA sample is contaminated with RNADNA bands are too small and have run out of the gelThe potential (voltage) applied across the gel is not strong enoughThe buffer system in which the gel is suspended is not doing its job correctly. The buffer might have to be made fresh.The electrophoresis apparatus is not in the ocrrect orientation (electrodes not connected to the right poles)Additionally, there could also be other reasons like: improper DNA extraction procedure. If you are running a gel after PCR and still do not see bands, look into whether the DNA is being amplified correctly. See if you are using the correct primers.There are several factors that influence the electrophoresis technique. A close examination of the results obtained will help you make decisions about your future experimental approach.


What are some examples of mixed method designs?

Some examples of mixed method designs include sequential explanatory design, concurrent triangulation design, and embedded design. These designs combine both qualitative and quantitative data collection and analysis techniques to provide a more comprehensive understanding of the research topic.


What is the main difference between protein electrophoresis and nucleic acid electrophoresis?

There are many similarities and differences between protein and DNA electrophoresis.Similarities:PAGE protein and DNA electrophoresis both cause separation by size, creating bands that are viewed by the scientist or a machine. The smallest segments more the fastest due to less friction with the surface of their medium or equipment.The movement of charges through the medium is what causes the DNA or proteins to move. Electrons move from the negative to positive end of the gel or capillary tube.Differences:In PAGE protein electrophoresis, a polyacrylamide gel is used to prevent convection from altering the movement of the proteins. If the proteins are charged, and there is a worry that the charge will affect the mobility of the protein segments, 1% SDS can be added to get rid of the mass/charge issue. This way, only the mass of the segment determines how far it moves. In DNA capillary electrophoresis, the size of the capillary is so small that it does not have room for convection to occur (it is only 20-50 microns wide). Thus, there is no medium in the capillary but DNA itself.In protein electrophoresis, the proteins are often dyed so their movement can be viewed with the naked eye, or a machine. With DNA capillary electrophoresis, DNA strands are made through DNA replication with dNTPs that are fluorescently labeled for the different nucleotides. Each base is labeled a different color. A fine laser lights up the DNA strand in the capillary tube and reads what color fluoresces. This is how the nucleotide is identified.Protein PAGE electrophoresis is used to determine the purity of a protein sample. It can also be used to see how large the chains are that make up a multi-chain protein if a denaturing agent is added. DNA electrophoresis is used to get the order of nucleotides in a DNA sequence. It is done by chopping the DNA sequence into many smaller bits and sequencing them, then putting them back together by lining them up according to sequence overlaps. This is called the "shotgun" method. Protein electrophoresis can figure out the order of about 15-20 amino acids by a similar method, but DNA electrophoresis can get up to 1000 nucleotides (~300 amino acids). DNA electrophoresis is limited by the low probability that the DNA sequence would be cut into a segment greater than 1000 nucleotides.

Related Questions

What is the aim of electrophoresis?

It is used to separate molecules by some properties


Can you put a turbo on a carbureted motor?

yes, it can be done with extensive modification of carburetor or by replacing it with specially designed carburetors. some designs put carburetor inside pressurized plenum chamber.


Some viva voce questions for electrophoresis?

1. WHAT IS ELECTROPHORESIS AND WHAT ARE THE IMPORTANTAPPLICATIONS OF ELECTROPHORESIS?Ans. Movement of charged particle in the electric field either towards cathode or anode whensubjected to an electric current is called electrophoresis.The following factors influence the movement of particles during the electrophoresis.(a) Electric current.(b) Net charge of the particle.(c) Size and shape of the particle.(d) Type of supporting media.(e) Buffer solution.Important Applications of ElectrophoresisThe technique of electrophoresis is used to separate and identify the(i) Serum proteins(ii) Serum lipoproteins(iii) Blood hemoglobins2. WHAT ARE THE DIFFERENT TYPES OF ELECTROPHORESIS?Ans. (a) Moving boundary electrophoresis: This technique was first introduced by TISELIUS in 1937(b) Zone electrophoresis: In this type of electrophoresis different types of supporting mediaare used. These are;(a) Paper electrophoresis(i) Whatman filter paper(ii) Cellulose acetate(b) Gel electrophoresis(i) Agarose.(ii) Polyacrylamide gel (used for the separation of isoenzymes).(iii) SDS-PAGE.(iv) Iso-electric focussing (proteins seperated in a medium possessing a stable pH gradient).(v) Immuno electrophoresis (for the separation of immunoglobulins).


Is chamber an adjective?

No. Chamber is a noun. In some uses, chambered can be the adjective.


What are the most common combustion chamber designs on mercruiser?

The most common combustion chamber designs on MerCruiser engines include the wedge-shaped and oval-shaped chambers. Wedge chambers promote better airflow and combustion efficiency, while oval chambers are known for smooth combustion and are typically found in larger displacement engines. These designs help optimize power output and fuel efficiency, catering to various marine applications. Additionally, some models may feature a pent-roof design for improved performance in high-output applications.


What are some separation variables with the molecules in electrophoresis?

hi. i dont know the question. ok bye.


For what purpose might one use capillary electrophoresis?

Capillary electrophoresis is a technique used in laboratories to separate molecules based on their charge in order to study and analyze them. Capillary electrophoresis uses an electric charge to force the movement of molecules since each molecule will go a varying distance based on the weight of the molecule and their charge. Some areas of study that use capillary electrophoresis include DNA sequencing and pharmaceutical analysis.


Does gel electrophoresis affect the case of either suspect?

This question is not complete, it lacks some information for me to correctly answer it.


Where can I get some ideas for new bathroom designs?

My bathroom is looking terrible. Where can I get some ideas for some new bathroom designs?


What are some popular designs for wood plaque signs?

Some popular designs for wood plaque signs include rustic farmhouse style, modern minimalist designs, and personalized custom designs with quotes or images.


What are some applications for gel electrophoresis used?

Paternity testing and crime lab applications (DNA matching) etc


What are the common stains that is used after DNA electrophoresis?

Common stains used after DNA electrophoresis include ethidium bromide, SYBR Safe, and GelRed. These stains intercalate with DNA and allow visualization under UV light. They are used to detect and analyze DNA fragments separated on the gel.