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In an ordered structure, such as in crystalline materials, molecules or atoms are typically joined through strong interactions like covalent bonds, ionic bonds, or metallic bonds. These interactions result in a regular, repeating arrangement that defines the material's properties. Additionally, intermolecular forces such as hydrogen bonds can play a role in organizing molecular structures, particularly in biological systems like proteins and nucleic acids. Overall, the specific type of molecules and the nature of their bonding will determine the characteristics of the ordered structure.

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