I am not sure exactly what you want to know. If the President is diligent and pays attention, he should be able to control the cabinet level agencies. If he wants to make changes, like any new executive, he can expect some resistance from the older employees, but if he is firm and knows how to manage, he should be able to exercise reasonable control. Of course, he is just one person and there are a huge number of workers-- he has to rely on his underlings to execute his policies, but that is what chief executives must be able to do.
If he want to cut the number of government workers or scale back or eliminate an entire department, as some presidential candidates have suggested in the past, he would face major difficulties from several sources. Government workers know how to lobby Congress and every government program has people who benefit from it, directly or indirectly. There was a reason why every agency or program was created and interested parties have a way of popping up everywhere whenever a program is threatened.
Sometimes agencies themselves have support from various interest groups, which can clash with the views of the President. Congress also has influence over the government's bureaucracy.
The executive branch includes the president, the vice-president, the cabinet and all the employees of all the departments and agencies headed by the cabinet secretaries.
No agencies work with the president. Members of his cabinet are usually the head of various departments.
Cabinet
The president, Vice President, cabinet members are the executive branch
Federal agencies in the United States are typically formed by the President by Executive Order. The heads of these agencies become members of the President's cabinet.
The executive branch (the President, cabinet, and regulatory agencies)
An Executive Assistant to the President, works closely with the president, providing assistance and advice. His cabinet, the CIA, and the Joint Chiefs of Staff.
The group that advises the President is his Cabinet. They are chosen by him to head the executive agencies and give him advice.
president at the top, cabinet departments in middle, agencies at bottom
president at the top, cabinet departments in middle, agencies at bottom
No it doesn't. :D